Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC9.47□□□□□ -0.89
UbbP0CG49 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UbbP0CG49 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
UbbP0CG49 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC9.47□□□□□ -0.89
UbbP0CG49 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UbbP0CG49 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
UbbP0CG49 Gm9244-201ENSMUST00000056767 2129 ntBASIC9.47□□□□□ -0.89
UbbP0CG49 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
UbbP0CG49 Gm6903-201ENSMUST00000160509 1366 ntBASIC9.47□□□□□ -0.89
UbbP0CG49 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UbbP0CG49 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UbbP0CG49 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UbbP0CG49 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
UbbP0CG49 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UbbP0CG49 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
UbbP0CG49 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UbbP0CG49 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
UbbP0CG49 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UbbP0CG49 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UbbP0CG49 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
UbbP0CG49 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
UbbP0CG49 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
UbbP0CG49 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
UbbP0CG49 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC9.46□□□□□ -0.89
UbbP0CG49 Gm18198-201ENSMUST00000204986 1551 ntBASIC9.46□□□□□ -0.89
UbbP0CG49 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
UbbP0CG49 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.89
UbbP0CG49 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
UbbP0CG49 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC9.46□□□□□ -0.89
UbbP0CG49 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.46□□□□□ -0.89
UbbP0CG49 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
UbbP0CG49 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
UbbP0CG49 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
UbbP0CG49 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
UbbP0CG49 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
UbbP0CG49 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
UbbP0CG49 Gm14193-201ENSMUST00000105067 153 ntBASIC9.46□□□□□ -0.9
UbbP0CG49 Gm15198-201ENSMUST00000117283 177 ntBASIC9.46□□□□□ -0.9
UbbP0CG49 Gm14398-201ENSMUST00000117287 1073 ntBASIC9.46□□□□□ -0.9
UbbP0CG49 Gm13809-201ENSMUST00000117921 597 ntBASIC9.46□□□□□ -0.9
UbbP0CG49 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.46□□□□□ -0.9
UbbP0CG49 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC9.46□□□□□ -0.9
UbbP0CG49 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC9.46□□□□□ -0.9
UbbP0CG49 Gm17040-202ENSMUST00000170597 889 ntBASIC9.46□□□□□ -0.9
UbbP0CG49 Gm5733-201ENSMUST00000190232 939 ntBASIC9.46□□□□□ -0.9
UbbP0CG49 Gm29067-201ENSMUST00000190821 470 ntBASIC9.46□□□□□ -0.9
UbbP0CG49 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC9.46□□□□□ -0.9
UbbP0CG49 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
UbbP0CG49 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.46□□□□□ -0.9
UbbP0CG49 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
UbbP0CG49 Gm10020-201ENSMUST00000081993 612 ntBASIC9.46□□□□□ -0.9
UbbP0CG49 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.46□□□□□ -0.9
UbbP0CG49 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
UbbP0CG49 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
UbbP0CG49 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
UbbP0CG49 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
UbbP0CG49 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
UbbP0CG49 AC165148.1-201ENSMUST00000224795 2372 ntBASIC9.46□□□□□ -0.9
UbbP0CG49 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
UbbP0CG49 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
UbbP0CG49 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
UbbP0CG49 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
UbbP0CG49 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
UbbP0CG49 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
UbbP0CG49 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.9
UbbP0CG49 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
UbbP0CG49 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
UbbP0CG49 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
UbbP0CG49 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC9.46□□□□□ -0.9
UbbP0CG49 Gm42851-201ENSMUST00000201325 1411 ntBASIC9.46□□□□□ -0.9
UbbP0CG49 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
UbbP0CG49 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
UbbP0CG49 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
UbbP0CG49 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
UbbP0CG49 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.46□□□□□ -0.9
UbbP0CG49 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC9.46□□□□□ -0.9
UbbP0CG49 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
UbbP0CG49 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
UbbP0CG49 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
UbbP0CG49 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
UbbP0CG49 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
UbbP0CG49 AC140462.2-201ENSMUST00000225718 2433 ntBASIC9.45□□□□□ -0.9
UbbP0CG49 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
UbbP0CG49 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
UbbP0CG49 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
UbbP0CG49 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC9.45□□□□□ -0.9
UbbP0CG49 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
UbbP0CG49 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
UbbP0CG49 CT009489.1-201ENSMUST00000227740 1893 ntBASIC9.45□□□□□ -0.9
UbbP0CG49 Gm37057-201ENSMUST00000192624 1916 ntBASIC9.45□□□□□ -0.9
UbbP0CG49 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
UbbP0CG49 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
UbbP0CG49 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
UbbP0CG49 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
UbbP0CG49 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
UbbP0CG49 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
UbbP0CG49 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC9.45□□□□□ -0.9
UbbP0CG49 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
UbbP0CG49 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
UbbP0CG49 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms