Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hoxb3P09026 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hoxb3P09026 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.23□□□□□ -0.61
Hoxb3P09026 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxb3P09026 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.23□□□□□ -0.61
Hoxb3P09026 Gm43380-201ENSMUST00000200421 220 ntBASIC11.23□□□□□ -0.61
Hoxb3P09026 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.23□□□□□ -0.61
Hoxb3P09026 Gm39288-201ENSMUST00000210554 446 ntBASIC11.23□□□□□ -0.61
Hoxb3P09026 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.23□□□□□ -0.61
Hoxb3P09026 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxb3P09026 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC11.23□□□□□ -0.61
Hoxb3P09026 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC11.23□□□□□ -0.61
Hoxb3P09026 AC158142.3-201ENSMUST00000226230 675 ntBASIC11.23□□□□□ -0.61
Hoxb3P09026 AC163646.3-201ENSMUST00000228879 772 ntBASIC11.23□□□□□ -0.61
Hoxb3P09026 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Hoxb3P09026 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hoxb3P09026 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxb3P09026 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Gap43-201ENSMUST00000102817 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxb3P09026 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Hoxb3P09026 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.23□□□□□ -0.61
Hoxb3P09026 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hoxb3P09026 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.22□□□□□ -0.61
Hoxb3P09026 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hoxb3P09026 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hoxb3P09026 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hoxb3P09026 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Hoxb3P09026 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Hoxb3P09026 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Hoxb3P09026 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Hoxb3P09026 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hoxb3P09026 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm15528-201ENSMUST00000117821 864 ntBASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm14630-201ENSMUST00000118057 246 ntBASIC11.22□□□□□ -0.61
Hoxb3P09026 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm8261-201ENSMUST00000119275 1208 ntBASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm15196-201ENSMUST00000121406 482 ntBASIC11.22□□□□□ -0.61
Hoxb3P09026 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm8464-202ENSMUST00000146697 1142 ntBASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm4750-201ENSMUST00000151942 1142 ntBASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm25554-201ENSMUST00000158075 113 ntBASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm25830-201ENSMUST00000158923 132 ntBASIC11.22□□□□□ -0.61
Hoxb3P09026 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxb3P09026 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Cep19-203ENSMUST00000169186 1320 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Hoxb3P09026 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm21778-201ENSMUST00000178779 471 ntBASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm20914-202ENSMUST00000188887 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hoxb3P09026 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm37599-201ENSMUST00000193067 489 ntBASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm8197-202ENSMUST00000193422 934 ntBASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm37306-201ENSMUST00000193447 1233 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxb3P09026 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.22□□□□□ -0.61
Hoxb3P09026 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC11.22□□□□□ -0.61
Hoxb3P09026 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxb3P09026 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxb3P09026 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.22□□□□□ -0.61
Hoxb3P09026 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms