Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.23□□□□□ -0.61
Atf6F6VAN0 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.23□□□□□ -0.61
Atf6F6VAN0 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.23□□□□□ -0.61
Atf6F6VAN0 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.23□□□□□ -0.61
Atf6F6VAN0 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.22□□□□□ -0.61
Atf6F6VAN0 Mir1896-201ENSMUST00000122641 81 ntBASIC11.22□□□□□ -0.61
Atf6F6VAN0 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.22□□□□□ -0.61
Atf6F6VAN0 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Gm27441-201ENSMUST00000185000 105 ntBASIC11.22□□□□□ -0.61
Atf6F6VAN0 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.22□□□□□ -0.61
Atf6F6VAN0 Gm42997-202ENSMUST00000200321 985 ntBASIC11.22□□□□□ -0.61
Atf6F6VAN0 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Gm18753-201ENSMUST00000201000 566 ntBASIC11.22□□□□□ -0.61
Atf6F6VAN0 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.22□□□□□ -0.61
Atf6F6VAN0 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.22□□□□□ -0.61
Atf6F6VAN0 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Snora73b-201ENSMUST00000083419 205 ntBASIC11.22□□□□□ -0.61
Atf6F6VAN0 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf6F6VAN0 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atf6F6VAN0 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.21□□□□□ -0.61
Atf6F6VAN0 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.21□□□□□ -0.61
Atf6F6VAN0 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atf6F6VAN0 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atf6F6VAN0 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.21□□□□□ -0.61
Atf6F6VAN0 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atf6F6VAN0 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Atf6F6VAN0 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Atf6F6VAN0 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Atf6F6VAN0 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Atf6F6VAN0 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Atf6F6VAN0 Gm25766-201ENSMUST00000104101 131 ntBASIC11.21□□□□□ -0.61
Atf6F6VAN0 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Atf6F6VAN0 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.21□□□□□ -0.61
Atf6F6VAN0 Gm12663-201ENSMUST00000118481 958 ntBASIC11.21□□□□□ -0.61
Atf6F6VAN0 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.21□□□□□ -0.61
Atf6F6VAN0 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC11.21□□□□□ -0.61
Atf6F6VAN0 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.21□□□□□ -0.61
Atf6F6VAN0 Gm25343-201ENSMUST00000157460 107 ntBASIC11.21□□□□□ -0.61
Atf6F6VAN0 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.21□□□□□ -0.61
Atf6F6VAN0 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.21□□□□□ -0.61
Atf6F6VAN0 Gm2875-201ENSMUST00000211333 360 ntBASIC11.21□□□□□ -0.61
Atf6F6VAN0 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Atf6F6VAN0 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC11.21□□□□□ -0.61
Atf6F6VAN0 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Atf6F6VAN0 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.21□□□□□ -0.61
Atf6F6VAN0 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.21□□□□□ -0.61
Atf6F6VAN0 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms