Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Gm8197-202ENSMUST00000193422 934 ntBASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Gm42851-201ENSMUST00000201325 1411 ntBASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc38Q8CDN8 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Gm23061-201ENSMUST00000102348 116 ntBASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Gm14585-201ENSMUST00000120713 634 ntBASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Gm13284-201ENSMUST00000121020 547 ntBASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Gm10731-201ENSMUST00000181171 448 ntBASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 AC115746.1-201ENSMUST00000228949 3617 ntBASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc38Q8CDN8 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Gm12566-201ENSMUST00000121479 359 ntBASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Snord55-201ENSMUST00000174939 79 ntBASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms