Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Gm11380-201ENSMUST00000118067 560 ntBASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Gm12337-201ENSMUST00000119634 400 ntBASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Gm11667-201ENSMUST00000119828 486 ntBASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Gm10169-201ENSMUST00000121822 348 ntBASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Mir1956-201ENSMUST00000157748 65 ntBASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Mir8091-201ENSMUST00000183602 139 ntBASIC12.01□□□□□ -0.49
Trim9Q8C7M3 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Gm7880-201ENSMUST00000203748 871 ntBASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim9Q8C7M3 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Trim9Q8C7M3 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12□□□□□ -0.49
Trim9Q8C7M3 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 AC154220.1-201ENSMUST00000225033 1705 ntBASIC12□□□□□ -0.49
Trim9Q8C7M3 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim9Q8C7M3 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 Gm45124-201ENSMUST00000206723 2755 ntBASIC12□□□□□ -0.49
Trim9Q8C7M3 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12□□□□□ -0.49
Trim9Q8C7M3 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim9Q8C7M3 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12□□□□□ -0.49
Trim9Q8C7M3 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC12□□□□□ -0.49
Trim9Q8C7M3 Gm14263-201ENSMUST00000117955 746 ntBASIC12□□□□□ -0.49
Trim9Q8C7M3 Gm15264-201ENSMUST00000118050 502 ntBASIC12□□□□□ -0.49
Trim9Q8C7M3 Gm9673-201ENSMUST00000119287 781 ntBASIC12□□□□□ -0.49
Trim9Q8C7M3 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12□□□□□ -0.49
Trim9Q8C7M3 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 Gm22334-201ENSMUST00000158070 133 ntBASIC12□□□□□ -0.49
Trim9Q8C7M3 Gm22902-201ENSMUST00000158488 302 ntBASIC12□□□□□ -0.49
Trim9Q8C7M3 Gm15744-201ENSMUST00000161734 213 ntBASIC12□□□□□ -0.49
Trim9Q8C7M3 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 Gm44155-201ENSMUST00000203923 412 ntBASIC12□□□□□ -0.49
Trim9Q8C7M3 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim9Q8C7M3 Gm7589-201ENSMUST00000085631 534 ntBASIC12□□□□□ -0.49
Trim9Q8C7M3 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim9Q8C7M3 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim9Q8C7M3 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC12□□□□□ -0.49
Trim9Q8C7M3 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 Gm10548-201ENSMUST00000097631 2629 ntBASIC12□□□□□ -0.49
Trim9Q8C7M3 Gm37058-201ENSMUST00000193393 1644 ntBASIC12□□□□□ -0.49
Trim9Q8C7M3 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim9Q8C7M3 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms