Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcc2Q6PDG5 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcc2Q6PDG5 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcc2Q6PDG5 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.75□□□□□ -0.37
Smarcc2Q6PDG5 AA474408-201ENSMUST00000098110 3339 ntBASIC12.75□□□□□ -0.37
Smarcc2Q6PDG5 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcc2Q6PDG5 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Gm23061-201ENSMUST00000102348 116 ntBASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Gm39288-201ENSMUST00000210554 446 ntBASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcc2Q6PDG5 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Gm14807-201ENSMUST00000116640 983 ntBASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Gm14270-201ENSMUST00000118388 846 ntBASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Gm3828-201ENSMUST00000121817 257 ntBASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Gm12030-201ENSMUST00000121917 223 ntBASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Gm25343-201ENSMUST00000157460 107 ntBASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Gm5865-201ENSMUST00000198713 637 ntBASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcc2Q6PDG5 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Gm12663-201ENSMUST00000118481 958 ntBASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms