Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Platr10-202ENSMUST00000191479 818 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm19798-201ENSMUST00000201502 457 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm33024-201ENSMUST00000203143 633 ntTSL 3 BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm18749-201ENSMUST00000222410 692 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 AC162940.1-201ENSMUST00000224745 1167 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 AC116390.1-201ENSMUST00000227975 670 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Amn1-202ENSMUST00000111535 1457 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Gm24981-201ENSMUST00000104459 132 ntBASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Mrps18b-202ENSMUST00000113782 803 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Gm29803-201ENSMUST00000205069 375 ntBASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Gm2981-201ENSMUST00000213947 694 ntBASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 1110017D15Rik-202ENSMUST00000095126 884 ntTSL 3 BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Hmgn2-203ENSMUST00000102553 1265 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Gm33080-201ENSMUST00000205429 172 ntBASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Gm21818-202ENSMUST00000225144 894 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 AC123533.3-201ENSMUST00000228056 454 ntBASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Fabp5-201ENSMUST00000029046 987 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Olfr1425-201ENSMUST00000087828 939 ntBASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Spg11Q3UHA3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Spg11Q3UHA3 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.02□□□□□ -0.8
Spg11Q3UHA3 Pdcd1lg2-201ENSMUST00000112576 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Spg11Q3UHA3 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Spg11Q3UHA3 Gm5697-201ENSMUST00000122295 2482 ntBASIC10.02□□□□□ -0.8
Spg11Q3UHA3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Spg11Q3UHA3 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Spg11Q3UHA3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Spg11Q3UHA3 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Spg11Q3UHA3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Spg11Q3UHA3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Spg11Q3UHA3 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Spg11Q3UHA3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Spg11Q3UHA3 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms