Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Tnfrsf22-204ENSMUST00000171066 1780 ntBASIC5.54□□□□□ -1.52
Ush2AQ2QI47 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ush2AQ2QI47 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ush2AQ2QI47 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ush2AQ2QI47 A130023I24Rik-201ENSMUST00000152709 1897 ntTSL 2 BASIC5.54□□□□□ -1.52
Ush2AQ2QI47 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ush2AQ2QI47 Nt5c1b-203ENSMUST00000143739 1570 ntTSL 2 BASIC5.54□□□□□ -1.52
Ush2AQ2QI47 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ush2AQ2QI47 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ush2AQ2QI47 BC048671-202ENSMUST00000167550 890 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ush2AQ2QI47 4930500F10Rik-201ENSMUST00000180701 1224 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ush2AQ2QI47 Gm29561-201ENSMUST00000187838 631 ntTSL 3 BASIC5.54□□□□□ -1.52
Ush2AQ2QI47 Gm43667-201ENSMUST00000198616 1095 ntBASIC5.54□□□□□ -1.52
Ush2AQ2QI47 Gm43033-201ENSMUST00000199682 425 ntBASIC5.54□□□□□ -1.52
Ush2AQ2QI47 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Ush2AQ2QI47 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ush2AQ2QI47 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC5.54□□□□□ -1.52
Ush2AQ2QI47 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ush2AQ2QI47 Ces1e-203ENSMUST00000176282 1883 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Ush2AQ2QI47 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ush2AQ2QI47 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ush2AQ2QI47 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ush2AQ2QI47 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm37521-201ENSMUST00000193177 2045 ntBASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm12061-201ENSMUST00000151881 479 ntTSL 3 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm11431-201ENSMUST00000155046 428 ntTSL 3 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Ear6-202ENSMUST00000169070 893 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 4930553I04Rik-201ENSMUST00000196722 670 ntBASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 AC142114.1-201ENSMUST00000227724 328 ntBASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Olfr698-201ENSMUST00000074981 936 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm43625-201ENSMUST00000199177 1539 ntBASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm44806-201ENSMUST00000205574 2303 ntBASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Abhd3-201ENSMUST00000002549 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Cfap126-204ENSMUST00000129651 766 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm25736-201ENSMUST00000175165 101 ntBASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Kcne3-204ENSMUST00000179842 1059 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 AC100406.1-201ENSMUST00000217305 480 ntBASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Nme7-201ENSMUST00000086028 834 ntTSL 5 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Olfr462-202ENSMUST00000213672 2021 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm23061-201ENSMUST00000102348 116 ntBASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Ighv2-4-201ENSMUST00000103447 350 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Tceal9-202ENSMUST00000113115 888 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Dcpp3-201ENSMUST00000115428 610 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm12038-201ENSMUST00000117322 207 ntBASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm8814-201ENSMUST00000119072 535 ntBASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm12508-201ENSMUST00000121282 480 ntBASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm15086-201ENSMUST00000143110 573 ntTSL 5 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm933-201ENSMUST00000179384 679 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm15100-201ENSMUST00000180357 573 ntTSL 5 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Olfr170-203ENSMUST00000218837 1008 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 4921515L22Rik-201ENSMUST00000218993 1537 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 AC131745.3-201ENSMUST00000223582 554 ntBASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Dhrs7b-201ENSMUST00000042281 1553 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Smim4-201ENSMUST00000049732 311 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Olfr170-201ENSMUST00000078603 1008 ntAPPRIS ALT1 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm4795-201ENSMUST00000095717 1008 ntBASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Hmox2-203ENSMUST00000120232 1287 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm12738-201ENSMUST00000122349 536 ntBASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm15410-201ENSMUST00000127763 544 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms