Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.39□□□□□ -0.43
GabpaQ00422 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
GabpaQ00422 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
GabpaQ00422 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
GabpaQ00422 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GabpaQ00422 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
GabpaQ00422 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
GabpaQ00422 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GabpaQ00422 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
GabpaQ00422 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GabpaQ00422 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GabpaQ00422 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
GabpaQ00422 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
GabpaQ00422 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
GabpaQ00422 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC12.38□□□□□ -0.43
GabpaQ00422 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.38□□□□□ -0.43
GabpaQ00422 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12.38□□□□□ -0.43
GabpaQ00422 Gm28671-201ENSMUST00000187036 692 ntBASIC12.38□□□□□ -0.43
GabpaQ00422 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Gm37860-201ENSMUST00000195380 1034 ntBASIC12.38□□□□□ -0.43
GabpaQ00422 Gm42732-201ENSMUST00000202887 1197 ntBASIC12.38□□□□□ -0.43
GabpaQ00422 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.38□□□□□ -0.43
GabpaQ00422 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.38□□□□□ -0.43
GabpaQ00422 Nsmce2-203ENSMUST00000227173 1122 ntBASIC12.38□□□□□ -0.43
GabpaQ00422 AC121567.1-201ENSMUST00000227213 842 ntBASIC12.38□□□□□ -0.43
GabpaQ00422 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
GabpaQ00422 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
GabpaQ00422 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
GabpaQ00422 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC12.38□□□□□ -0.43
GabpaQ00422 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.38□□□□□ -0.43
GabpaQ00422 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
GabpaQ00422 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
GabpaQ00422 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.37□□□□□ -0.43
GabpaQ00422 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
GabpaQ00422 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.37□□□□□ -0.43
GabpaQ00422 AC151836.1-201ENSMUST00000228730 1637 ntBASIC12.37□□□□□ -0.43
GabpaQ00422 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
GabpaQ00422 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
GabpaQ00422 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Gm11919-201ENSMUST00000117609 721 ntBASIC12.37□□□□□ -0.43
GabpaQ00422 Gm13094-201ENSMUST00000117930 409 ntBASIC12.37□□□□□ -0.43
GabpaQ00422 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Gm5526-201ENSMUST00000153604 423 ntBASIC12.37□□□□□ -0.43
GabpaQ00422 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
GabpaQ00422 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
GabpaQ00422 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC12.37□□□□□ -0.43
GabpaQ00422 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Gm8601-201ENSMUST00000182096 909 ntBASIC12.37□□□□□ -0.43
GabpaQ00422 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC12.37□□□□□ -0.43
GabpaQ00422 Gm37197-201ENSMUST00000195607 401 ntBASIC12.37□□□□□ -0.43
GabpaQ00422 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.37□□□□□ -0.43
GabpaQ00422 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.37□□□□□ -0.43
GabpaQ00422 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.37□□□□□ -0.43
GabpaQ00422 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
GabpaQ00422 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
GabpaQ00422 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.37□□□□□ -0.43
GabpaQ00422 Gm8684-201ENSMUST00000195078 1564 ntBASIC12.37□□□□□ -0.43
GabpaQ00422 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms