Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
Cacna1aP97445 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC10.14□□□□□ -0.79
Cacna1aP97445 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 BB187690-201ENSMUST00000198619 1176 ntBASIC10.14□□□□□ -0.79
Cacna1aP97445 Gm9353-201ENSMUST00000200472 604 ntBASIC10.14□□□□□ -0.79
Cacna1aP97445 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC10.14□□□□□ -0.79
Cacna1aP97445 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC10.14□□□□□ -0.79
Cacna1aP97445 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC10.14□□□□□ -0.79
Cacna1aP97445 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC10.14□□□□□ -0.79
Cacna1aP97445 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC10.14□□□□□ -0.79
Cacna1aP97445 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC10.14□□□□□ -0.79
Cacna1aP97445 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.14□□□□□ -0.79
Cacna1aP97445 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Cacna1aP97445 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Cacna1aP97445 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
Cacna1aP97445 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
Cacna1aP97445 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Cacna1aP97445 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Gm13505-201ENSMUST00000121666 817 ntBASIC10.14□□□□□ -0.79
Cacna1aP97445 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.14□□□□□ -0.79
Cacna1aP97445 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC10.14□□□□□ -0.79
Cacna1aP97445 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC10.14□□□□□ -0.79
Cacna1aP97445 Gm17782-201ENSMUST00000174345 880 ntBASIC10.14□□□□□ -0.79
Cacna1aP97445 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC10.14□□□□□ -0.79
Cacna1aP97445 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Platr10-202ENSMUST00000191479 818 ntBASIC10.14□□□□□ -0.79
Cacna1aP97445 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC10.14□□□□□ -0.79
Cacna1aP97445 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC10.14□□□□□ -0.79
Cacna1aP97445 AC159006.3-201ENSMUST00000226918 664 ntBASIC10.14□□□□□ -0.79
Cacna1aP97445 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cacna1aP97445 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cacna1aP97445 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cacna1aP97445 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cacna1aP97445 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.13□□□□□ -0.79
Cacna1aP97445 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cacna1aP97445 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cacna1aP97445 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Cacna1aP97445 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.13□□□□□ -0.79
Cacna1aP97445 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cacna1aP97445 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cacna1aP97445 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC10.13□□□□□ -0.79
Cacna1aP97445 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cacna1aP97445 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Cacna1aP97445 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC10.13□□□□□ -0.79
Cacna1aP97445 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC10.13□□□□□ -0.79
Cacna1aP97445 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Cacna1aP97445 AC134860.2-201ENSMUST00000225277 1036 ntBASIC10.13□□□□□ -0.79
Cacna1aP97445 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cacna1aP97445 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC10.13□□□□□ -0.79
Cacna1aP97445 Gm5278-201ENSMUST00000055957 552 ntBASIC10.13□□□□□ -0.79
Cacna1aP97445 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cacna1aP97445 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cacna1aP97445 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cacna1aP97445 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cacna1aP97445 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cacna1aP97445 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cacna1aP97445 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Cacna1aP97445 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.13□□□□□ -0.79
Cacna1aP97445 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cacna1aP97445 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cacna1aP97445 Mir3100-201ENSMUST00000174918 65 ntBASIC10.12□□□□□ -0.79
Cacna1aP97445 Snord55-201ENSMUST00000174939 79 ntBASIC10.12□□□□□ -0.79
Cacna1aP97445 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Cacna1aP97445 Gm5738-201ENSMUST00000206016 779 ntBASIC10.12□□□□□ -0.79
Cacna1aP97445 Gm6859-201ENSMUST00000218614 989 ntBASIC10.12□□□□□ -0.79
Cacna1aP97445 CT009550.1-201ENSMUST00000225750 864 ntBASIC10.12□□□□□ -0.79
Cacna1aP97445 AC107711.4-201ENSMUST00000228948 440 ntBASIC10.12□□□□□ -0.79
Cacna1aP97445 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Cacna1aP97445 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Cacna1aP97445 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cacna1aP97445 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cacna1aP97445 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cacna1aP97445 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cacna1aP97445 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Cacna1aP97445 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cacna1aP97445 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cacna1aP97445 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Cacna1aP97445 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.12□□□□□ -0.79
Cacna1aP97445 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms