Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Gm15620-201ENSMUST00000122949 270 ntBASIC11.84□□□□□ -0.51
CiitaP79621 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC11.84□□□□□ -0.51
CiitaP79621 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Gm16547-201ENSMUST00000159474 293 ntBASIC11.84□□□□□ -0.51
CiitaP79621 Gm8451-201ENSMUST00000170338 447 ntBASIC11.84□□□□□ -0.51
CiitaP79621 Gm44498-201ENSMUST00000199509 111 ntBASIC11.84□□□□□ -0.51
CiitaP79621 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
CiitaP79621 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CiitaP79621 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC11.84□□□□□ -0.51
CiitaP79621 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.84□□□□□ -0.51
CiitaP79621 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC11.84□□□□□ -0.51
CiitaP79621 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Gm5453-201ENSMUST00000080866 447 ntBASIC11.84□□□□□ -0.51
CiitaP79621 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
CiitaP79621 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
CiitaP79621 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CiitaP79621 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CiitaP79621 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.83□□□□□ -0.52
CiitaP79621 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Gm42833-201ENSMUST00000196019 2124 ntBASIC11.83□□□□□ -0.52
CiitaP79621 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC11.83□□□□□ -0.52
CiitaP79621 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC11.83□□□□□ -0.52
CiitaP79621 Gm12745-201ENSMUST00000121767 214 ntBASIC11.83□□□□□ -0.52
CiitaP79621 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC11.83□□□□□ -0.52
CiitaP79621 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Gm45500-201ENSMUST00000211676 803 ntBASIC11.83□□□□□ -0.52
CiitaP79621 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
CiitaP79621 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.83□□□□□ -0.52
CiitaP79621 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.83□□□□□ -0.52
CiitaP79621 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.83□□□□□ -0.52
CiitaP79621 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.83□□□□□ -0.52
CiitaP79621 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CiitaP79621 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CiitaP79621 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.82□□□□□ -0.52
CiitaP79621 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.82□□□□□ -0.52
CiitaP79621 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
CiitaP79621 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.82□□□□□ -0.52
CiitaP79621 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.82□□□□□ -0.52
CiitaP79621 Gm11996-201ENSMUST00000117538 915 ntBASIC11.82□□□□□ -0.52
CiitaP79621 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.82□□□□□ -0.52
CiitaP79621 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.82□□□□□ -0.52
CiitaP79621 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.82□□□□□ -0.52
CiitaP79621 Gm20414-201ENSMUST00000172918 646 ntBASIC11.82□□□□□ -0.52
CiitaP79621 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.82□□□□□ -0.52
CiitaP79621 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.82□□□□□ -0.52
CiitaP79621 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms