Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC10.79□□□□□ -0.68
Pdx1P52946 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.79□□□□□ -0.68
Pdx1P52946 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.79□□□□□ -0.68
Pdx1P52946 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Pdx1P52946 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC10.79□□□□□ -0.68
Pdx1P52946 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Pdx1P52946 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Pdx1P52946 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.79□□□□□ -0.68
Pdx1P52946 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Pdx1P52946 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC10.78□□□□□ -0.68
Pdx1P52946 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Pdx1P52946 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Pdx1P52946 AA474408-201ENSMUST00000098110 3339 ntBASIC10.78□□□□□ -0.68
Pdx1P52946 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.78□□□□□ -0.68
Pdx1P52946 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.78□□□□□ -0.68
Pdx1P52946 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Pdx1P52946 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Gm12389-201ENSMUST00000117696 418 ntBASIC10.78□□□□□ -0.68
Pdx1P52946 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.78□□□□□ -0.68
Pdx1P52946 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Mir1893-201ENSMUST00000122565 83 ntBASIC10.78□□□□□ -0.68
Pdx1P52946 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC10.78□□□□□ -0.68
Pdx1P52946 Gm22379-201ENSMUST00000157480 131 ntBASIC10.78□□□□□ -0.68
Pdx1P52946 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC10.78□□□□□ -0.68
Pdx1P52946 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC10.78□□□□□ -0.68
Pdx1P52946 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Gm9358-201ENSMUST00000183067 927 ntBASIC10.78□□□□□ -0.68
Pdx1P52946 Mir8091-201ENSMUST00000183602 139 ntBASIC10.78□□□□□ -0.68
Pdx1P52946 Gm27441-201ENSMUST00000185000 105 ntBASIC10.78□□□□□ -0.68
Pdx1P52946 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC10.78□□□□□ -0.68
Pdx1P52946 Gm18968-201ENSMUST00000221319 862 ntBASIC10.78□□□□□ -0.68
Pdx1P52946 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC10.78□□□□□ -0.68
Pdx1P52946 AC129308.3-201ENSMUST00000225652 524 ntBASIC10.78□□□□□ -0.68
Pdx1P52946 BX649293.1-201ENSMUST00000227437 631 ntBASIC10.78□□□□□ -0.68
Pdx1P52946 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Pdx1P52946 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.78□□□□□ -0.68
Pdx1P52946 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Pdx1P52946 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Pdx1P52946 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.78□□□□□ -0.68
Pdx1P52946 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdx1P52946 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.78□□□□□ -0.68
Pdx1P52946 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
Pdx1P52946 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Pdx1P52946 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.77□□□□□ -0.68
Pdx1P52946 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pdx1P52946 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pdx1P52946 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pdx1P52946 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pdx1P52946 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Pdx1P52946 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.77□□□□□ -0.69
Pdx1P52946 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Pdx1P52946 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Pdx1P52946 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Pdx1P52946 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms