Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC9.11□□□□□ -0.95
Col8a2P25318 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC9.11□□□□□ -0.95
Col8a2P25318 AC154572.1-201ENSMUST00000226098 1204 ntBASIC9.11□□□□□ -0.95
Col8a2P25318 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Col8a2P25318 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.11□□□□□ -0.95
Col8a2P25318 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Col8a2P25318 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.11□□□□□ -0.95
Col8a2P25318 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Col8a2P25318 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Col8a2P25318 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Col8a2P25318 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC9.1□□□□□ -0.95
Col8a2P25318 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Gm43334-201ENSMUST00000197740 1318 ntBASIC9.1□□□□□ -0.95
Col8a2P25318 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC9.1□□□□□ -0.95
Col8a2P25318 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Col8a2P25318 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Col8a2P25318 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Ighv13-1-201ENSMUST00000103480 294 ntBASIC9.1□□□□□ -0.95
Col8a2P25318 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Col8a2P25318 Gm5944-201ENSMUST00000118182 1001 ntBASIC9.1□□□□□ -0.95
Col8a2P25318 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC9.1□□□□□ -0.95
Col8a2P25318 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Gm22146-201ENSMUST00000157397 288 ntBASIC9.1□□□□□ -0.95
Col8a2P25318 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Col8a2P25318 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC9.1□□□□□ -0.95
Col8a2P25318 Gm9574-201ENSMUST00000173127 845 ntBASIC9.1□□□□□ -0.95
Col8a2P25318 Mipep-ps-201ENSMUST00000177439 291 ntBASIC9.1□□□□□ -0.95
Col8a2P25318 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Col8a2P25318 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Col8a2P25318 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Col8a2P25318 Gm5298-201ENSMUST00000201122 892 ntBASIC9.1□□□□□ -0.95
Col8a2P25318 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Gm44605-201ENSMUST00000206892 949 ntBASIC9.1□□□□□ -0.95
Col8a2P25318 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC9.1□□□□□ -0.95
Col8a2P25318 Gm18499-201ENSMUST00000220808 1021 ntBASIC9.1□□□□□ -0.95
Col8a2P25318 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.1□□□□□ -0.95
Col8a2P25318 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Col8a2P25318 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Gm42499-201ENSMUST00000196193 1412 ntBASIC9.1□□□□□ -0.95
Col8a2P25318 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.1□□□□□ -0.95
Col8a2P25318 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC9.1□□□□□ -0.95
Col8a2P25318 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Col8a2P25318 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col8a2P25318 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC9.09□□□□□ -0.95
Col8a2P25318 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC9.09□□□□□ -0.95
Col8a2P25318 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Col8a2P25318 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Col8a2P25318 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC9.09□□□□□ -0.95
Col8a2P25318 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms