Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hmgn1P18608 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC9.95□□□□□ -0.82
Hmgn1P18608 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hmgn1P18608 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hmgn1P18608 Cdh18-207ENSMUST00000226693 2165 ntBASIC9.95□□□□□ -0.82
Hmgn1P18608 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hmgn1P18608 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hmgn1P18608 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Hmgn1P18608 Gm44888-201ENSMUST00000209119 2541 ntBASIC9.95□□□□□ -0.82
Hmgn1P18608 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hmgn1P18608 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hmgn1P18608 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hmgn1P18608 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.94□□□□□ -0.82
Hmgn1P18608 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Hmgn1P18608 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Hmgn1P18608 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC9.94□□□□□ -0.82
Hmgn1P18608 Gm15515-201ENSMUST00000117827 822 ntBASIC9.94□□□□□ -0.82
Hmgn1P18608 Gm12266-201ENSMUST00000120311 962 ntBASIC9.94□□□□□ -0.82
Hmgn1P18608 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC9.94□□□□□ -0.82
Hmgn1P18608 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.94□□□□□ -0.82
Hmgn1P18608 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC9.94□□□□□ -0.82
Hmgn1P18608 Gm25661-201ENSMUST00000157704 296 ntBASIC9.94□□□□□ -0.82
Hmgn1P18608 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
Hmgn1P18608 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.94□□□□□ -0.82
Hmgn1P18608 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.94□□□□□ -0.82
Hmgn1P18608 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.94□□□□□ -0.82
Hmgn1P18608 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.94□□□□□ -0.82
Hmgn1P18608 Ighv1-62-201ENSMUST00000193406 350 ntBASIC9.94□□□□□ -0.82
Hmgn1P18608 Gm37981-201ENSMUST00000194280 535 ntBASIC9.94□□□□□ -0.82
Hmgn1P18608 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC9.94□□□□□ -0.82
Hmgn1P18608 Gm6905-201ENSMUST00000205729 511 ntBASIC9.94□□□□□ -0.82
Hmgn1P18608 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC9.94□□□□□ -0.82
Hmgn1P18608 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Hmgn1P18608 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Hmgn1P18608 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Hmgn1P18608 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hmgn1P18608 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Hmgn1P18608 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmgn1P18608 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.93□□□□□ -0.82
Hmgn1P18608 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmgn1P18608 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hmgn1P18608 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC9.93□□□□□ -0.82
Hmgn1P18608 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmgn1P18608 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmgn1P18608 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.93□□□□□ -0.82
Hmgn1P18608 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmgn1P18608 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hmgn1P18608 Gm7993-201ENSMUST00000200970 1384 ntBASIC9.93□□□□□ -0.82
Hmgn1P18608 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmgn1P18608 Gm11661-201ENSMUST00000121761 1327 ntBASIC9.93□□□□□ -0.82
Hmgn1P18608 Gm13035-201ENSMUST00000117496 342 ntBASIC9.93□□□□□ -0.82
Hmgn1P18608 Gm7851-201ENSMUST00000117574 323 ntBASIC9.93□□□□□ -0.82
Hmgn1P18608 Gm12337-201ENSMUST00000119634 400 ntBASIC9.93□□□□□ -0.82
Hmgn1P18608 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC9.93□□□□□ -0.82
Hmgn1P18608 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmgn1P18608 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmgn1P18608 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hmgn1P18608 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hmgn1P18608 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmgn1P18608 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.93□□□□□ -0.82
Hmgn1P18608 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC9.93□□□□□ -0.82
Hmgn1P18608 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hmgn1P18608 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC9.93□□□□□ -0.82
Hmgn1P18608 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmgn1P18608 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmgn1P18608 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Hmgn1P18608 Gm21142-201ENSMUST00000179999 2604 ntBASIC9.93□□□□□ -0.82
Hmgn1P18608 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmgn1P18608 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmgn1P18608 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hmgn1P18608 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmgn1P18608 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC9.93□□□□□ -0.82
Hmgn1P18608 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmgn1P18608 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Hmgn1P18608 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.93□□□□□ -0.82
Hmgn1P18608 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Hmgn1P18608 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmgn1P18608 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.92□□□□□ -0.82
Hmgn1P18608 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Hmgn1P18608 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms