Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hmga1P17095 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Hmga1P17095 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hmga1P17095 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hmga1P17095 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hmga1P17095 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.12□□□□□ -0.63
Hmga1P17095 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hmga1P17095 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Hmga1P17095 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Hmga1P17095 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hmga1P17095 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hmga1P17095 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hmga1P17095 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hmga1P17095 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hmga1P17095 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hmga1P17095 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Hmga1P17095 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hmga1P17095 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Hmga1P17095 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.12□□□□□ -0.63
Hmga1P17095 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.11□□□□□ -0.63
Hmga1P17095 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.11□□□□□ -0.63
Hmga1P17095 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.11□□□□□ -0.63
Hmga1P17095 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.11□□□□□ -0.63
Hmga1P17095 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hmga1P17095 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.11□□□□□ -0.63
Hmga1P17095 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.11□□□□□ -0.63
Hmga1P17095 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.11□□□□□ -0.63
Hmga1P17095 Gm11544-201ENSMUST00000120215 382 ntBASIC11.11□□□□□ -0.63
Hmga1P17095 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.11□□□□□ -0.63
Hmga1P17095 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC11.11□□□□□ -0.63
Hmga1P17095 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Gm7928-201ENSMUST00000181249 701 ntBASIC11.11□□□□□ -0.63
Hmga1P17095 Gm8601-201ENSMUST00000182096 909 ntBASIC11.11□□□□□ -0.63
Hmga1P17095 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.11□□□□□ -0.63
Hmga1P17095 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hmga1P17095 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 AC124581.2-201ENSMUST00000225459 282 ntBASIC11.11□□□□□ -0.63
Hmga1P17095 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.11□□□□□ -0.63
Hmga1P17095 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC11.11□□□□□ -0.63
Hmga1P17095 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.11□□□□□ -0.63
Hmga1P17095 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hmga1P17095 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Hmga1P17095 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.11□□□□□ -0.63
Hmga1P17095 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmga1P17095 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmga1P17095 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hmga1P17095 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.1□□□□□ -0.63
Hmga1P17095 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hmga1P17095 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmga1P17095 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmga1P17095 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.1□□□□□ -0.63
Hmga1P17095 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmga1P17095 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmga1P17095 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmga1P17095 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.1□□□□□ -0.63
Hmga1P17095 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmga1P17095 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hmga1P17095 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.1□□□□□ -0.63
Hmga1P17095 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hmga1P17095 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hmga1P17095 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmga1P17095 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmga1P17095 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms