Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Gm5865-201ENSMUST00000198713 637 ntBASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Gm8574-201ENSMUST00000203207 924 ntBASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 CT025694.1-201ENSMUST00000226188 934 ntBASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Gm14028-201ENSMUST00000117434 479 ntBASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Gm16481-201ENSMUST00000119074 1227 ntBASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Gm8302-201ENSMUST00000119217 852 ntBASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Gm16219-201ENSMUST00000120096 274 ntBASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Gm22885-201ENSMUST00000157410 107 ntBASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Gm28450-201ENSMUST00000187349 638 ntBASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Gm7255-201ENSMUST00000187371 908 ntBASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Gm18363-201ENSMUST00000221671 730 ntBASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Gm28624-201ENSMUST00000186430 2131 ntBASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Pcdh1F7BJK1 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Gm42941-201ENSMUST00000200347 1321 ntBASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Gm38192-201ENSMUST00000194364 1847 ntBASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms