Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Gm15615-201ENSMUST00000118876 198 ntBASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Gm8302-201ENSMUST00000119217 852 ntBASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Gm16219-201ENSMUST00000120096 274 ntBASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Mir1896-201ENSMUST00000122641 81 ntBASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Gm18367-201ENSMUST00000176139 600 ntBASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Mir6927-201ENSMUST00000184494 71 ntBASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Gm10774-201ENSMUST00000188689 204 ntBASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.3□□□□□ -0.76
Nkd1Q99MH6 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.3□□□□□ -0.76
Nkd1Q99MH6 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkd1Q99MH6 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Gm7666-201ENSMUST00000146631 819 ntBASIC10.29□□□□□ -0.76
Nkd1Q99MH6 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Gm24992-201ENSMUST00000157412 130 ntBASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Gm21778-201ENSMUST00000178779 471 ntBASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Gm37835-201ENSMUST00000193305 361 ntBASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.29□□□□□ -0.76
Nkd1Q99MH6 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Gm9111-201ENSMUST00000219394 709 ntBASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Ginm1-202ENSMUST00000065124 300 ntBASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Gm25125-201ENSMUST00000083340 136 ntBASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkd1Q99MH6 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Nkd1Q99MH6 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkd1Q99MH6 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkd1Q99MH6 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkd1Q99MH6 Gm38116-201ENSMUST00000193873 1533 ntBASIC10.28□□□□□ -0.76
Nkd1Q99MH6 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkd1Q99MH6 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkd1Q99MH6 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkd1Q99MH6 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.28□□□□□ -0.76
Nkd1Q99MH6 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkd1Q99MH6 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.28□□□□□ -0.76
Nkd1Q99MH6 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Nkd1Q99MH6 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkd1Q99MH6 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms