Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 POM121L14P-201ENST00000406100 1558 ntBASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 KRT18P36-201ENST00000411618 1276 ntBASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 OR2R1P-201ENST00000441404 914 ntBASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 AC022210.1-201ENST00000449856 793 ntBASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 AC022217.1-201ENST00000521069 738 ntBASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 MIR6787-201ENST00000616675 61 ntBASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 CR392039.2-201ENST00000623182 509 ntBASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 AC144522.1-201ENST00000625111 1658 ntBASIC16.37■□□□□ 0.21
CHAMP1Q96JM3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 AC008620.2-201ENST00000510294 1569 ntBASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 KRT18P15-201ENST00000458108 1291 ntBASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 AL160314.3-201ENST00000556041 767 ntBASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 MIR4538-201ENST00000581377 78 ntBASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 AL022328.1-201ENST00000610050 478 ntBASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 TP73-211ENST00000604074 4806 ntTSL 5 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 AL023775.1-201ENST00000454907 1746 ntBASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms