Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Gm22138-201ENSMUST00000158748 128 ntBASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Gm43671-201ENSMUST00000200422 433 ntBASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Gm32111-201ENSMUST00000207689 846 ntBASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.26□□□□□ -0.61
Trub1Q8C0D0 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Gm12616-201ENSMUST00000118594 382 ntBASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Gm12624-201ENSMUST00000177615 382 ntBASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Gm12621-201ENSMUST00000177760 382 ntBASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Gm12615-201ENSMUST00000177970 382 ntBASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Gm12622-201ENSMUST00000177975 382 ntBASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Gm12627-201ENSMUST00000178412 382 ntBASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Gm12625-201ENSMUST00000179122 382 ntBASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Gm12614-201ENSMUST00000179586 382 ntBASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Gm12613-201ENSMUST00000180323 382 ntBASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Gm8531-201ENSMUST00000188319 893 ntBASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Gm19091-201ENSMUST00000208120 978 ntBASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trub1Q8C0D0 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms