Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm5159-201ENSMUST00000212733 1652 ntBASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Gm12028-201ENSMUST00000118065 436 ntBASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Gm6441-201ENSMUST00000120983 696 ntBASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Gm5808-201ENSMUST00000178090 357 ntBASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Gm27316-201ENSMUST00000184884 277 ntBASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Gm28671-201ENSMUST00000187036 692 ntBASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Gm43667-201ENSMUST00000198616 1095 ntBASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 BX649293.1-201ENSMUST00000227437 631 ntBASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp6nlQ80XC3 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Gm15707-201ENSMUST00000118804 996 ntBASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Gm6677-201ENSMUST00000195100 441 ntBASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Gm18555-201ENSMUST00000197935 584 ntBASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Gm8170-201ENSMUST00000218581 945 ntBASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 AC154759.1-201ENSMUST00000224137 1159 ntBASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Usp6nlQ80XC3 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Usp6nlQ80XC3 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms