Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Znf48Q3US17 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Znf48Q3US17 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Znf48Q3US17 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Znf48Q3US17 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Znf48Q3US17 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Znf48Q3US17 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.44□□□□□ -0.9
Znf48Q3US17 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Znf48Q3US17 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Znf48Q3US17 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Znf48Q3US17 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Znf48Q3US17 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC9.43□□□□□ -0.9
Znf48Q3US17 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Znf48Q3US17 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Znf48Q3US17 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Znf48Q3US17 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC9.43□□□□□ -0.9
Znf48Q3US17 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Znf48Q3US17 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC9.43□□□□□ -0.9
Znf48Q3US17 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC9.43□□□□□ -0.9
Znf48Q3US17 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC9.43□□□□□ -0.9
Znf48Q3US17 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC9.43□□□□□ -0.9
Znf48Q3US17 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC9.43□□□□□ -0.9
Znf48Q3US17 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC9.43□□□□□ -0.9
Znf48Q3US17 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.43□□□□□ -0.9
Znf48Q3US17 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.43□□□□□ -0.9
Znf48Q3US17 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Ighv1-48-201ENSMUST00000191795 294 ntBASIC9.43□□□□□ -0.9
Znf48Q3US17 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.43□□□□□ -0.9
Znf48Q3US17 Gm5542-201ENSMUST00000195485 1089 ntBASIC9.43□□□□□ -0.9
Znf48Q3US17 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Gm2965-201ENSMUST00000198365 343 ntBASIC9.43□□□□□ -0.9
Znf48Q3US17 Gm44412-201ENSMUST00000203018 294 ntBASIC9.43□□□□□ -0.9
Znf48Q3US17 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
Znf48Q3US17 AC132237.2-201ENSMUST00000221702 1209 ntBASIC9.43□□□□□ -0.9
Znf48Q3US17 AC137950.3-201ENSMUST00000228250 246 ntBASIC9.43□□□□□ -0.9
Znf48Q3US17 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Znf48Q3US17 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Znf48Q3US17 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Znf48Q3US17 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC9.43□□□□□ -0.9
Znf48Q3US17 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Gm42879-201ENSMUST00000198656 2214 ntBASIC9.43□□□□□ -0.9
Znf48Q3US17 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC9.43□□□□□ -0.9
Znf48Q3US17 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Znf48Q3US17 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Znf48Q3US17 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Znf48Q3US17 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms