Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 AC121860.1-201ENSMUST00000227908 2787 ntBASIC8.94□□□□□ -0.98
Trim63Q38HM4 Serpina3m-201ENSMUST00000101078 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Adgrl3-213ENSMUST00000120292 5026 ntTSL 5 BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Serpina3m-202ENSMUST00000168797 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Ighm-202ENSMUST00000177715 1698 ntAPPRIS P5 BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 3632454L22Rik-202ENSMUST00000153610 2872 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Eci2-201ENSMUST00000021854 1746 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Tbx22-203ENSMUST00000168174 5217 ntAPPRIS P4 TSL 2 BASIC8.94□□□□□ -0.98
Trim63Q38HM4 AU040320-203ENSMUST00000102608 4073 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Gm37446-201ENSMUST00000193015 4136 ntBASIC8.94□□□□□ -0.98
Trim63Q38HM4 AC124732.3-201ENSMUST00000221835 1765 ntBASIC8.94□□□□□ -0.98
Trim63Q38HM4 Gm21759-201ENSMUST00000178345 1828 ntBASIC8.94□□□□□ -0.98
Trim63Q38HM4 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Cd22-213ENSMUST00000190617 3230 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Dhcr7-202ENSMUST00000124340 2556 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Zkscan1-204ENSMUST00000110963 4670 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Mbd1-201ENSMUST00000097530 2833 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Hyal2-206ENSMUST00000195681 2968 ntBASIC8.93□□□□□ -0.98
Trim63Q38HM4 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Strip2-202ENSMUST00000115224 3524 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC8.93□□□□□ -0.98
Trim63Q38HM4 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC8.93□□□□□ -0.98
Trim63Q38HM4 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Gm6152-201ENSMUST00000151704 340 ntBASIC8.93□□□□□ -0.98
Trim63Q38HM4 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Gm24513-201ENSMUST00000174964 138 ntBASIC8.93□□□□□ -0.98
Trim63Q38HM4 Gm25025-201ENSMUST00000175018 111 ntBASIC8.93□□□□□ -0.98
Trim63Q38HM4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Trim63Q38HM4 1700063K16Rik-202ENSMUST00000191341 952 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Gm37301-201ENSMUST00000195412 568 ntBASIC8.93□□□□□ -0.98
Trim63Q38HM4 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Olfr209-203ENSMUST00000208875 1194 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Gm6983-201ENSMUST00000214912 628 ntBASIC8.93□□□□□ -0.98
Trim63Q38HM4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC8.93□□□□□ -0.98
Trim63Q38HM4 CT943659.1-201ENSMUST00000215459 326 ntBASIC8.93□□□□□ -0.98
Trim63Q38HM4 Gm18065-201ENSMUST00000221395 526 ntBASIC8.93□□□□□ -0.98
Trim63Q38HM4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Gm10076-201ENSMUST00000073238 384 ntBASIC8.93□□□□□ -0.98
Trim63Q38HM4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Gm37827-201ENSMUST00000194486 1542 ntBASIC8.93□□□□□ -0.98
Trim63Q38HM4 Lig3-203ENSMUST00000092849 4560 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Cyp2c54-201ENSMUST00000048959 1769 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Zbtb37-201ENSMUST00000159250 2473 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Pvt1-203ENSMUST00000181657 2798 ntTSL 5 BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Trmt13-201ENSMUST00000041524 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Plk4-201ENSMUST00000026858 3479 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Slco5a1-206ENSMUST00000147606 3615 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Lrrc15-201ENSMUST00000064606 5310 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
Trim63Q38HM4 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Zbtb34-201ENSMUST00000091037 6510 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Cpne5-201ENSMUST00000024805 4344 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Rassf5-202ENSMUST00000068564 3076 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Atxn7l1-212ENSMUST00000146040 2973 ntAPPRIS P5 TSL 5 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Pus7l-201ENSMUST00000049151 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 BC030343-201ENSMUST00000199606 2439 ntBASIC8.92□□□□□ -0.98
Trim63Q38HM4 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Apol7b-201ENSMUST00000089469 2210 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 4930571K23Rik-201ENSMUST00000166958 2153 ntBASIC8.92□□□□□ -0.98
Trim63Q38HM4 Zcchc12-203ENSMUST00000115257 2051 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Olfr272-203ENSMUST00000213989 1973 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Il6st-209ENSMUST00000184445 1870 ntTSL 5 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Gm9072-201ENSMUST00000218390 1514 ntBASIC8.92□□□□□ -0.98
Trim63Q38HM4 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Gm42462-201ENSMUST00000196543 1363 ntBASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms