Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.04□□□□□ -0.48
Lig3P97386 Gm37852-201ENSMUST00000193027 350 ntBASIC12.04□□□□□ -0.48
Lig3P97386 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.04□□□□□ -0.48
Lig3P97386 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lig3P97386 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lig3P97386 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.04□□□□□ -0.48
Lig3P97386 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Lig3P97386 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lig3P97386 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lig3P97386 Spata33-207ENSMUST00000212760 4074 ntBASIC12.04□□□□□ -0.48
Lig3P97386 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.03□□□□□ -0.48
Lig3P97386 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lig3P97386 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lig3P97386 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Lig3P97386 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.03□□□□□ -0.48
Lig3P97386 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.03□□□□□ -0.48
Lig3P97386 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.03□□□□□ -0.48
Lig3P97386 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lig3P97386 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Gm11500-201ENSMUST00000118237 601 ntBASIC12.03□□□□□ -0.48
Lig3P97386 Gm11244-201ENSMUST00000121243 237 ntBASIC12.03□□□□□ -0.48
Lig3P97386 Gm14441-201ENSMUST00000121960 540 ntBASIC12.03□□□□□ -0.48
Lig3P97386 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Lig3P97386 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.03□□□□□ -0.48
Lig3P97386 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lig3P97386 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.03□□□□□ -0.48
Lig3P97386 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Gm26368-201ENSMUST00000157826 118 ntBASIC12.03□□□□□ -0.48
Lig3P97386 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Lig3P97386 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Lig3P97386 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Gm17192-201ENSMUST00000169031 511 ntBASIC12.03□□□□□ -0.48
Lig3P97386 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lig3P97386 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.03□□□□□ -0.48
Lig3P97386 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.03□□□□□ -0.48
Lig3P97386 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lig3P97386 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.03□□□□□ -0.48
Lig3P97386 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.03□□□□□ -0.48
Lig3P97386 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.03□□□□□ -0.48
Lig3P97386 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lig3P97386 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.03□□□□□ -0.48
Lig3P97386 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.03□□□□□ -0.48
Lig3P97386 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lig3P97386 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC12.02□□□□□ -0.48
Lig3P97386 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lig3P97386 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Lig3P97386 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Lig3P97386 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC12.02□□□□□ -0.48
Lig3P97386 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Lig3P97386 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Lig3P97386 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Lig3P97386 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Lig3P97386 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.02□□□□□ -0.48
Lig3P97386 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.02□□□□□ -0.48
Lig3P97386 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Lig3P97386 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Lig3P97386 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
Lig3P97386 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Lig3P97386 Gm15620-201ENSMUST00000122949 270 ntBASIC12.02□□□□□ -0.49
Lig3P97386 Gm18776-201ENSMUST00000188833 654 ntBASIC12.02□□□□□ -0.49
Lig3P97386 Gm43380-201ENSMUST00000200421 220 ntBASIC12.02□□□□□ -0.49
Lig3P97386 Gm43671-201ENSMUST00000200422 433 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms