Protein–RNA interactions for Protein: P41778

Pbx1, Pre-B-cell leukemia transcription factor 1, mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx1P41778 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pbx1P41778 Gm14942-201ENSMUST00000119642 336 ntBASIC11.73□□□□□ -0.53
Pbx1P41778 Gm12997-201ENSMUST00000120207 640 ntBASIC11.73□□□□□ -0.53
Pbx1P41778 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC11.73□□□□□ -0.53
Pbx1P41778 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pbx1P41778 Gm6407-201ENSMUST00000176468 549 ntBASIC11.73□□□□□ -0.53
Pbx1P41778 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pbx1P41778 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pbx1P41778 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pbx1P41778 Mir6927-201ENSMUST00000184494 71 ntBASIC11.73□□□□□ -0.53
Pbx1P41778 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.73□□□□□ -0.53
Pbx1P41778 Gm37583-201ENSMUST00000195460 2487 ntBASIC11.73□□□□□ -0.53
Pbx1P41778 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC11.73□□□□□ -0.53
Pbx1P41778 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.73□□□□□ -0.53
Pbx1P41778 Gm17831-201ENSMUST00000205579 900 ntBASIC11.73□□□□□ -0.53
Pbx1P41778 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pbx1P41778 Gm8162-201ENSMUST00000213951 665 ntBASIC11.73□□□□□ -0.53
Pbx1P41778 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pbx1P41778 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pbx1P41778 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pbx1P41778 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pbx1P41778 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pbx1P41778 Gm10263-201ENSMUST00000085163 300 ntBASIC11.73□□□□□ -0.53
Pbx1P41778 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pbx1P41778 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pbx1P41778 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pbx1P41778 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pbx1P41778 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pbx1P41778 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.72□□□□□ -0.53
Pbx1P41778 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC11.72□□□□□ -0.53
Pbx1P41778 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.72□□□□□ -0.53
Pbx1P41778 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.72□□□□□ -0.53
Pbx1P41778 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pbx1P41778 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pbx1P41778 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pbx1P41778 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pbx1P41778 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pbx1P41778 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pbx1P41778 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pbx1P41778 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Pbx1P41778 Gm16518-201ENSMUST00000117960 508 ntBASIC11.72□□□□□ -0.53
Pbx1P41778 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pbx1P41778 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Gm16165-201ENSMUST00000160140 795 ntBASIC11.72□□□□□ -0.53
Pbx1P41778 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC11.72□□□□□ -0.53
Pbx1P41778 Gm37020-201ENSMUST00000195303 992 ntBASIC11.72□□□□□ -0.53
Pbx1P41778 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Pbx1P41778 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.72□□□□□ -0.53
Pbx1P41778 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.72□□□□□ -0.53
Pbx1P41778 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Gm25580-201ENSMUST00000083409 327 ntBASIC11.72□□□□□ -0.53
Pbx1P41778 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC11.72□□□□□ -0.53
Pbx1P41778 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pbx1P41778 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pbx1P41778 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pbx1P41778 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pbx1P41778 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pbx1P41778 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pbx1P41778 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.71□□□□□ -0.53
Pbx1P41778 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pbx1P41778 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pbx1P41778 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pbx1P41778 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pbx1P41778 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pbx1P41778 Gm37909-201ENSMUST00000193157 2159 ntBASIC11.71□□□□□ -0.53
Pbx1P41778 Cdh18-207ENSMUST00000226693 2165 ntBASIC11.71□□□□□ -0.53
Pbx1P41778 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pbx1P41778 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pbx1P41778 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.71□□□□□ -0.53
Pbx1P41778 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms