Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Gm8385-201ENSMUST00000058999 643 ntBASIC9.51□□□□□ -0.89
UbbP0CG49 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
UbbP0CG49 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UbbP0CG49 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UbbP0CG49 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.51□□□□□ -0.89
UbbP0CG49 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
UbbP0CG49 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
UbbP0CG49 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC9.51□□□□□ -0.89
UbbP0CG49 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
UbbP0CG49 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC9.51□□□□□ -0.89
UbbP0CG49 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
UbbP0CG49 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC9.5□□□□□ -0.89
UbbP0CG49 Gm8111-201ENSMUST00000117659 987 ntBASIC9.5□□□□□ -0.89
UbbP0CG49 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.5□□□□□ -0.89
UbbP0CG49 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
UbbP0CG49 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Gm17376-201ENSMUST00000166016 84 ntBASIC9.5□□□□□ -0.89
UbbP0CG49 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC9.5□□□□□ -0.89
UbbP0CG49 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.5□□□□□ -0.89
UbbP0CG49 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC9.5□□□□□ -0.89
UbbP0CG49 Gm7003-201ENSMUST00000195089 312 ntBASIC9.5□□□□□ -0.89
UbbP0CG49 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 AC154319.1-201ENSMUST00000216330 312 ntBASIC9.5□□□□□ -0.89
UbbP0CG49 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC9.5□□□□□ -0.89
UbbP0CG49 AL589735.1-201ENSMUST00000224353 270 ntBASIC9.5□□□□□ -0.89
UbbP0CG49 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
UbbP0CG49 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
UbbP0CG49 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC9.5□□□□□ -0.89
UbbP0CG49 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
UbbP0CG49 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
UbbP0CG49 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
UbbP0CG49 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.5□□□□□ -0.89
UbbP0CG49 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
UbbP0CG49 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Gm6170-201ENSMUST00000187672 1388 ntBASIC9.5□□□□□ -0.89
UbbP0CG49 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
UbbP0CG49 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UbbP0CG49 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
UbbP0CG49 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
UbbP0CG49 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UbbP0CG49 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UbbP0CG49 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
UbbP0CG49 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
UbbP0CG49 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
UbbP0CG49 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
UbbP0CG49 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UbbP0CG49 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UbbP0CG49 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
UbbP0CG49 Gm5403-201ENSMUST00000117105 2795 ntBASIC9.49□□□□□ -0.89
UbbP0CG49 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
UbbP0CG49 Gm21115-201ENSMUST00000187565 2578 ntBASIC9.49□□□□□ -0.89
UbbP0CG49 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UbbP0CG49 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
UbbP0CG49 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC9.49□□□□□ -0.89
UbbP0CG49 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UbbP0CG49 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
UbbP0CG49 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UbbP0CG49 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UbbP0CG49 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
UbbP0CG49 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UbbP0CG49 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC9.49□□□□□ -0.89
UbbP0CG49 Gm14592-201ENSMUST00000117201 560 ntBASIC9.49□□□□□ -0.89
UbbP0CG49 Gm12218-201ENSMUST00000117666 399 ntBASIC9.49□□□□□ -0.89
UbbP0CG49 Gm11244-201ENSMUST00000121243 237 ntBASIC9.49□□□□□ -0.89
UbbP0CG49 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC9.49□□□□□ -0.89
UbbP0CG49 Gm9089-201ENSMUST00000122027 526 ntBASIC9.49□□□□□ -0.89
UbbP0CG49 Gm24844-201ENSMUST00000158679 127 ntBASIC9.49□□□□□ -0.89
UbbP0CG49 Gm43186-201ENSMUST00000198130 824 ntBASIC9.49□□□□□ -0.89
UbbP0CG49 Gm43852-201ENSMUST00000202098 917 ntBASIC9.49□□□□□ -0.89
UbbP0CG49 Gm17825-201ENSMUST00000206836 794 ntBASIC9.49□□□□□ -0.89
UbbP0CG49 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.49□□□□□ -0.89
UbbP0CG49 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC9.49□□□□□ -0.89
UbbP0CG49 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC9.49□□□□□ -0.89
UbbP0CG49 CT009546.1-201ENSMUST00000222573 1120 ntBASIC9.49□□□□□ -0.89
UbbP0CG49 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UbbP0CG49 Ntng1-201ENSMUST00000051253 327 ntBASIC9.49□□□□□ -0.89
UbbP0CG49 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
UbbP0CG49 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
UbbP0CG49 Gm7742-201ENSMUST00000167648 1527 ntBASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms