Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.21□□□□□ -0.77
IghmP01872 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
IghmP01872 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC10.21□□□□□ -0.77
IghmP01872 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.21□□□□□ -0.77
IghmP01872 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
IghmP01872 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
IghmP01872 Gm25580-201ENSMUST00000083409 327 ntBASIC10.21□□□□□ -0.77
IghmP01872 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
IghmP01872 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.21□□□□□ -0.78
IghmP01872 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
IghmP01872 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
IghmP01872 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
IghmP01872 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
IghmP01872 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
IghmP01872 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
IghmP01872 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
IghmP01872 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
IghmP01872 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
IghmP01872 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
IghmP01872 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
IghmP01872 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
IghmP01872 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.21□□□□□ -0.78
IghmP01872 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
IghmP01872 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
IghmP01872 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
IghmP01872 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
IghmP01872 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC10.2□□□□□ -0.78
IghmP01872 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
IghmP01872 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC10.2□□□□□ -0.78
IghmP01872 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.2□□□□□ -0.78
IghmP01872 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Gm5244-201ENSMUST00000164001 339 ntBASIC10.2□□□□□ -0.78
IghmP01872 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC10.2□□□□□ -0.78
IghmP01872 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
IghmP01872 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.2□□□□□ -0.78
IghmP01872 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Gm9645-201ENSMUST00000197131 792 ntBASIC10.2□□□□□ -0.78
IghmP01872 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.2□□□□□ -0.78
IghmP01872 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.2□□□□□ -0.78
IghmP01872 Gm44155-201ENSMUST00000203923 412 ntBASIC10.2□□□□□ -0.78
IghmP01872 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.2□□□□□ -0.78
IghmP01872 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.2□□□□□ -0.78
IghmP01872 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
IghmP01872 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
IghmP01872 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.2□□□□□ -0.78
IghmP01872 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
IghmP01872 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
IghmP01872 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
IghmP01872 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
IghmP01872 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC10.19□□□□□ -0.78
IghmP01872 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
IghmP01872 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.19□□□□□ -0.78
IghmP01872 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
IghmP01872 Gm38312-201ENSMUST00000195426 1746 ntBASIC10.19□□□□□ -0.78
IghmP01872 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
IghmP01872 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
IghmP01872 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
IghmP01872 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
IghmP01872 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
IghmP01872 Gm12097-201ENSMUST00000121523 1414 ntBASIC10.19□□□□□ -0.78
IghmP01872 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.19□□□□□ -0.78
IghmP01872 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
IghmP01872 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.19□□□□□ -0.78
IghmP01872 Gm16518-201ENSMUST00000117960 508 ntBASIC10.19□□□□□ -0.78
IghmP01872 Gm13408-201ENSMUST00000119822 798 ntBASIC10.19□□□□□ -0.78
IghmP01872 Gm11952-201ENSMUST00000121172 821 ntBASIC10.19□□□□□ -0.78
IghmP01872 Gm13935-201ENSMUST00000121859 798 ntBASIC10.19□□□□□ -0.78
IghmP01872 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
IghmP01872 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
IghmP01872 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.19□□□□□ -0.78
IghmP01872 Gm6485-201ENSMUST00000160676 439 ntBASIC10.19□□□□□ -0.78
IghmP01872 Gm5210-201ENSMUST00000182150 1010 ntBASIC10.19□□□□□ -0.78
IghmP01872 Gm19927-201ENSMUST00000185792 781 ntBASIC10.19□□□□□ -0.78
IghmP01872 Gm37299-201ENSMUST00000193951 826 ntBASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms