Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rrp8Q9DB85 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rrp8Q9DB85 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rrp8Q9DB85 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.78□□□□□ -0.68
Rrp8Q9DB85 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.78□□□□□ -0.68
Rrp8Q9DB85 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rrp8Q9DB85 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rrp8Q9DB85 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rrp8Q9DB85 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rrp8Q9DB85 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rrp8Q9DB85 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rrp8Q9DB85 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rrp8Q9DB85 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rrp8Q9DB85 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rrp8Q9DB85 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rrp8Q9DB85 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rrp8Q9DB85 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rrp8Q9DB85 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
Rrp8Q9DB85 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rrp8Q9DB85 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Rrp8Q9DB85 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Rrp8Q9DB85 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.77□□□□□ -0.68
Rrp8Q9DB85 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rrp8Q9DB85 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Rrp8Q9DB85 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.77□□□□□ -0.68
Rrp8Q9DB85 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Rrp8Q9DB85 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Gm22495-201ENSMUST00000104492 126 ntBASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Gm15982-201ENSMUST00000121681 554 ntBASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Zcwpw2-203ENSMUST00000187803 372 ntBASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Gm33080-201ENSMUST00000205429 172 ntBASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Gm6331-201ENSMUST00000217890 450 ntBASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Gm5513-201ENSMUST00000072982 1218 ntBASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 AC090962.2-201ENSMUST00000225064 1801 ntBASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rrp8Q9DB85 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rrp8Q9DB85 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rrp8Q9DB85 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.76□□□□□ -0.69
Rrp8Q9DB85 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rrp8Q9DB85 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.76□□□□□ -0.69
Rrp8Q9DB85 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Rrp8Q9DB85 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rrp8Q9DB85 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rrp8Q9DB85 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC10.76□□□□□ -0.69
Rrp8Q9DB85 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.76□□□□□ -0.69
Rrp8Q9DB85 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rrp8Q9DB85 Gm42858-201ENSMUST00000202512 1704 ntBASIC10.76□□□□□ -0.69
Rrp8Q9DB85 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rrp8Q9DB85 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Rrp8Q9DB85 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rrp8Q9DB85 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.76□□□□□ -0.69
Rrp8Q9DB85 Mir181d-201ENSMUST00000102383 72 ntBASIC10.76□□□□□ -0.69
Rrp8Q9DB85 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Rrp8Q9DB85 Gng5-ps-201ENSMUST00000120931 205 ntBASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 393.6 ms