Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Gm15352-201ENSMUST00000118696 270 ntBASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Gm22846-201ENSMUST00000157706 270 ntBASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Mir5120-201ENSMUST00000175020 78 ntBASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Chmp4cQ9D7F7 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chmp4cQ9D7F7 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Gm15615-201ENSMUST00000118876 198 ntBASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Gm15432-201ENSMUST00000121106 195 ntBASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Gm43852-201ENSMUST00000202098 917 ntBASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Gm43372-201ENSMUST00000202662 3016 ntBASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp4cQ9D7F7 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Gm25076-201ENSMUST00000104098 132 ntBASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Gm8876-201ENSMUST00000120768 1122 ntBASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Chmp4cQ9D7F7 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 AC121870.2-201ENSMUST00000214343 1870 ntBASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms