Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Gm16166-201ENSMUST00000118291 787 ntBASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Gm4879-201ENSMUST00000122190 1272 ntBASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Olfml3-204ENSMUST00000169286 874 ntBASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Gm5778-201ENSMUST00000171003 1072 ntBASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Gm19009-201ENSMUST00000223072 823 ntBASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga4Q91XY4 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Spata33-207ENSMUST00000212760 4074 ntBASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Gm37905-201ENSMUST00000195310 341 ntBASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Gm10263-201ENSMUST00000085163 300 ntBASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 AC121870.2-201ENSMUST00000214343 1870 ntBASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga4Q91XY4 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms