Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Gm43274-201ENSMUST00000202545 5000 ntBASIC11.32□□□□□ -0.6
Trim60Q8VI40 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.32□□□□□ -0.6
Trim60Q8VI40 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Gm23200-201ENSMUST00000104379 132 ntBASIC11.32□□□□□ -0.6
Trim60Q8VI40 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.32□□□□□ -0.6
Trim60Q8VI40 Gm44315-201ENSMUST00000203041 219 ntBASIC11.32□□□□□ -0.6
Trim60Q8VI40 Gm43916-201ENSMUST00000205062 967 ntBASIC11.32□□□□□ -0.6
Trim60Q8VI40 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Gm23105-201ENSMUST00000083719 134 ntBASIC11.32□□□□□ -0.6
Trim60Q8VI40 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Gm11735-201ENSMUST00000106377 1581 ntBASIC11.32□□□□□ -0.6
Trim60Q8VI40 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim60Q8VI40 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Gm23272-201ENSMUST00000104053 129 ntBASIC11.31□□□□□ -0.6
Trim60Q8VI40 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Gm7857-201ENSMUST00000117957 358 ntBASIC11.31□□□□□ -0.6
Trim60Q8VI40 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.31□□□□□ -0.6
Trim60Q8VI40 Gm8737-201ENSMUST00000122208 642 ntBASIC11.31□□□□□ -0.6
Trim60Q8VI40 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Gm27341-201ENSMUST00000183570 106 ntBASIC11.31□□□□□ -0.6
Trim60Q8VI40 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.31□□□□□ -0.6
Trim60Q8VI40 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim60Q8VI40 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.31□□□□□ -0.6
Trim60Q8VI40 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim60Q8VI40 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.31□□□□□ -0.6
Trim60Q8VI40 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim60Q8VI40 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Trim60Q8VI40 AA474408-201ENSMUST00000098110 3339 ntBASIC11.3□□□□□ -0.6
Trim60Q8VI40 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms