Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim29Q8R2Q0 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Gm9463-201ENSMUST00000206707 601 ntBASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Gm2875-201ENSMUST00000211333 360 ntBASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim29Q8R2Q0 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Gm27441-201ENSMUST00000185000 105 ntBASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Gm17877-201ENSMUST00000192578 814 ntBASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Gm45770-201ENSMUST00000212105 616 ntBASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim29Q8R2Q0 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim29Q8R2Q0 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim29Q8R2Q0 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim29Q8R2Q0 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim29Q8R2Q0 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim29Q8R2Q0 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim29Q8R2Q0 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim29Q8R2Q0 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim29Q8R2Q0 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim29Q8R2Q0 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim29Q8R2Q0 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim29Q8R2Q0 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim29Q8R2Q0 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.5□□□□□ -0.41
Trim29Q8R2Q0 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim29Q8R2Q0 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim29Q8R2Q0 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim29Q8R2Q0 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.5□□□□□ -0.41
Trim29Q8R2Q0 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms