Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Gm17107-201ENSMUST00000170983 553 ntBASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Gm20474-201ENSMUST00000180089 596 ntBASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Gm29487-201ENSMUST00000190146 256 ntBASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 AC174647.1-201ENSMUST00000227419 1271 ntBASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 AC123061.1-201ENSMUST00000228021 999 ntBASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Gm25483-201ENSMUST00000083224 227 ntBASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx54Q8K4L0 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Gm42815-201ENSMUST00000198787 1470 ntBASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Gm43102-201ENSMUST00000201004 2324 ntBASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Gm12463-201ENSMUST00000118271 849 ntBASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Gm8864-201ENSMUST00000118653 1010 ntBASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Gm14153-201ENSMUST00000119923 1139 ntBASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 n-R5s154-201ENSMUST00000122513 108 ntBASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Gm22669-201ENSMUST00000158723 318 ntBASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Gm6713-201ENSMUST00000216137 1446 ntBASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx54Q8K4L0 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 AC116596.1-201ENSMUST00000228112 1762 ntBASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Gm15031-201ENSMUST00000121341 210 ntBASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Gm28391-201ENSMUST00000185202 379 ntBASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Gm29528-201ENSMUST00000186699 379 ntBASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Gm29526-201ENSMUST00000187217 379 ntBASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 AC124772.3-201ENSMUST00000222535 575 ntBASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 AC102327.1-201ENSMUST00000226389 742 ntBASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Gm38034-201ENSMUST00000193915 2069 ntBASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms