Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Gm12337-201ENSMUST00000119634 400 ntBASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Gm25661-201ENSMUST00000157704 296 ntBASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Gm44506-201ENSMUST00000206278 965 ntBASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 CT009546.1-201ENSMUST00000222573 1120 ntBASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Olfr584-201ENSMUST00000098210 964 ntBASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Gm24891-201ENSMUST00000104391 136 ntBASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Gm8302-201ENSMUST00000119217 852 ntBASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Gm12136-201ENSMUST00000120460 1209 ntBASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Gm5733-201ENSMUST00000190232 939 ntBASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Gm8574-201ENSMUST00000203207 924 ntBASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Gm19091-201ENSMUST00000208120 978 ntBASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Gm18212-201ENSMUST00000211678 889 ntBASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Gm21811-201ENSMUST00000096485 930 ntBASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms