Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Mir1896-201ENSMUST00000122641 81 ntBASIC8.98□□□□□ -0.97
Smco3Q8BQM7 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 AC113082.1-201ENSMUST00000217324 327 ntBASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Gm9823-201ENSMUST00000051212 327 ntBASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Elmo1-201ENSMUST00000072519 5464 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Gabrb3-206ENSMUST00000196198 4348 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Gm38357-201ENSMUST00000195382 2464 ntBASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Ank3-206ENSMUST00000092434 5886 ntAPPRIS P4 TSL 5 BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 St5-202ENSMUST00000079282 4255 ntAPPRIS P4 TSL 5 BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Cmtr1-201ENSMUST00000024816 6380 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smco3Q8BQM7 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Gm15617-201ENSMUST00000118973 771 ntBASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Snora78-201ENSMUST00000158630 128 ntBASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Ap1g1-206ENSMUST00000179104 1096 ntBASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Gm9728-201ENSMUST00000200197 1055 ntBASIC8.97□□□□□ -0.97
Smco3Q8BQM7 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Olfr284-202ENSMUST00000206647 966 ntBASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Gm45113-201ENSMUST00000207518 165 ntBASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Aprt-ps-201ENSMUST00000212311 505 ntBASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 AC141438.2-201ENSMUST00000215068 271 ntBASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Arhgef33-209ENSMUST00000225223 714 ntBASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Gm5537-201ENSMUST00000091117 1252 ntBASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Pik3cg-201ENSMUST00000053215 5871 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Pkd1l3-203ENSMUST00000212537 6576 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 March6-201ENSMUST00000090227 6260 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Lrrk2-201ENSMUST00000060642 8275 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Asph-211ENSMUST00000108339 6453 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco3Q8BQM7 Sdhaf3-201ENSMUST00000040826 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Smco3Q8BQM7 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Smco3Q8BQM7 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Smco3Q8BQM7 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms