Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Gm8968-201ENSMUST00000199133 1303 ntBASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Gm12736-201ENSMUST00000119330 236 ntBASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Gm14639-201ENSMUST00000120850 866 ntBASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Gm14699-201ENSMUST00000122340 228 ntBASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Gm6216-201ENSMUST00000182390 687 ntBASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Gm43117-201ENSMUST00000198531 379 ntBASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Gm42687-201ENSMUST00000199075 164 ntBASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Gm18164-201ENSMUST00000213769 927 ntBASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Gm18166-201ENSMUST00000215557 927 ntBASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 AC163638.2-201ENSMUST00000224920 827 ntBASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Gm8730-201ENSMUST00000076373 954 ntBASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx55Q6ZPL9 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Gm12397-201ENSMUST00000117674 615 ntBASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Gm14231-201ENSMUST00000120090 592 ntBASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Gm5302-201ENSMUST00000202130 796 ntBASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Gm18256-201ENSMUST00000209087 907 ntBASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Gm8796-201ENSMUST00000219122 936 ntBASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx55Q6ZPL9 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.46□□□□□ -0.42
Ddx55Q6ZPL9 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ddx55Q6ZPL9 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ddx55Q6ZPL9 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ddx55Q6ZPL9 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ddx55Q6ZPL9 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ddx55Q6ZPL9 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ddx55Q6ZPL9 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ddx55Q6ZPL9 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Gm38312-201ENSMUST00000195426 1746 ntBASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms