Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Gm5705-201ENSMUST00000066241 711 ntBASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Gcm1-201ENSMUST00000024104 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Ankk1-201ENSMUST00000034792 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Atxn7l1-212ENSMUST00000146040 2973 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 AC159813.1-201ENSMUST00000222671 2263 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Olfr126-203ENSMUST00000217487 1859 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Ccdc136-209ENSMUST00000181464 3444 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 1810034E14Rik-201ENSMUST00000181403 1805 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Brcc3-201ENSMUST00000033544 4310 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Rdh9-201ENSMUST00000052652 2698 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Ighg3-202ENSMUST00000223179 2414 ntAPPRIS P5 BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Apol11b-204ENSMUST00000181467 1933 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Gm2553-201ENSMUST00000215986 605 ntBASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Cts7-204ENSMUST00000225321 1257 ntBASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Gm44189-201ENSMUST00000204387 3083 ntBASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Atg7-201ENSMUST00000032457 3761 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Cdh18-207ENSMUST00000226693 2165 ntBASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Gm44067-201ENSMUST00000203350 2971 ntTSL 5 BASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 AC153498.1-201ENSMUST00000219775 2722 ntBASIC10.35□□□□□ -0.75
Rnf220Q6PDX6 Zfp958-202ENSMUST00000202692 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Gm30373-201ENSMUST00000215774 3500 ntTSL 5 BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Mitf-202ENSMUST00000043637 4881 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Slc26a1-202ENSMUST00000119270 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Slc26a1-204ENSMUST00000163328 3015 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Gm42633-201ENSMUST00000198853 2764 ntBASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Arhgap4-205ENSMUST00000114407 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Gm23061-201ENSMUST00000102348 116 ntBASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Gm6334-201ENSMUST00000207083 228 ntBASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Gpr63-201ENSMUST00000038920 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms