Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Sh2d1a-201ENSMUST00000005839 883 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Gm14111-201ENSMUST00000119851 999 ntBASIC11.12□□□□□ -0.63
Bdp1Q571C7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Gm3052-201ENSMUST00000186409 829 ntBASIC11.12□□□□□ -0.63
Bdp1Q571C7 AC129590.1-201ENSMUST00000225573 852 ntBASIC11.12□□□□□ -0.63
Bdp1Q571C7 Olfr1512-201ENSMUST00000071221 942 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Gm8055-201ENSMUST00000099956 1008 ntBASIC11.12□□□□□ -0.63
Bdp1Q571C7 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Fsip1-202ENSMUST00000028821 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Gm38309-201ENSMUST00000192063 1518 ntBASIC11.12□□□□□ -0.63
Bdp1Q571C7 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Bdp1Q571C7 Gm42833-201ENSMUST00000196019 2124 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Bdp1Q571C7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Bdp1Q571C7 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Smok3c-202ENSMUST00000178402 1515 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm9458-201ENSMUST00000135273 727 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm25145-201ENSMUST00000177640 110 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm26913-201ENSMUST00000182391 732 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm27953-201ENSMUST00000185171 143 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC11.11□□□□□ -0.63
Bdp1Q571C7 AC160931.1-201ENSMUST00000223298 413 ntTSL 3 BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Ccdc120-201ENSMUST00000033490 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.11□□□□□ -0.63
Bdp1Q571C7 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm29272-201ENSMUST00000185476 696 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm21919-201ENSMUST00000185653 696 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm28446-201ENSMUST00000186508 694 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm28680-201ENSMUST00000186743 480 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm21824-201ENSMUST00000186810 696 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm21862-201ENSMUST00000186957 696 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm21796-201ENSMUST00000187116 696 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm21795-201ENSMUST00000187263 696 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm28814-201ENSMUST00000187334 696 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm21720-201ENSMUST00000187428 696 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm20827-201ENSMUST00000187928 696 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm21766-201ENSMUST00000187962 696 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm21837-201ENSMUST00000188117 696 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm21829-201ENSMUST00000188787 696 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm21892-201ENSMUST00000189182 696 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm21777-201ENSMUST00000189307 696 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm28247-201ENSMUST00000189329 696 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm28350-201ENSMUST00000189453 696 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm21906-201ENSMUST00000189760 696 ntBASIC11.11□□□□□ -0.63
Bdp1Q571C7 Gm29411-201ENSMUST00000189889 696 ntBASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms