Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Gm9540-201ENSMUST00000188230 478 ntBASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Gm24844-201ENSMUST00000158679 127 ntBASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Gm8959-201ENSMUST00000213150 571 ntBASIC11.6□□□□□ -0.55
Trim43aQ3TL54 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.6□□□□□ -0.55
Trim43aQ3TL54 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim43aQ3TL54 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Gm7851-201ENSMUST00000117574 323 ntBASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Gm15515-201ENSMUST00000117827 822 ntBASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Gm23694-201ENSMUST00000179335 110 ntBASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Gm43916-201ENSMUST00000205062 967 ntBASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms