Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Atxn1P54254 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Atxn1P54254 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.95□□□□□ -0.66
Atxn1P54254 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Atxn1P54254 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC10.95□□□□□ -0.66
Atxn1P54254 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Atxn1P54254 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.95□□□□□ -0.66
Atxn1P54254 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Gm12684-201ENSMUST00000118675 999 ntBASIC10.95□□□□□ -0.66
Atxn1P54254 Gm14441-201ENSMUST00000121960 540 ntBASIC10.95□□□□□ -0.66
Atxn1P54254 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC10.95□□□□□ -0.66
Atxn1P54254 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC10.95□□□□□ -0.66
Atxn1P54254 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.95□□□□□ -0.66
Atxn1P54254 Zcwpw2-203ENSMUST00000187803 372 ntBASIC10.95□□□□□ -0.66
Atxn1P54254 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC10.95□□□□□ -0.66
Atxn1P54254 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Atxn1P54254 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.95□□□□□ -0.66
Atxn1P54254 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Atxn1P54254 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Atxn1P54254 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Gm43167-201ENSMUST00000202001 1606 ntBASIC10.95□□□□□ -0.66
Atxn1P54254 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atxn1P54254 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.94□□□□□ -0.66
Atxn1P54254 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Atxn1P54254 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC10.94□□□□□ -0.66
Atxn1P54254 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.94□□□□□ -0.66
Atxn1P54254 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.94□□□□□ -0.66
Atxn1P54254 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Atxn1P54254 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Atxn1P54254 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Atxn1P54254 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Atxn1P54254 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Atxn1P54254 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Atxn1P54254 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Atxn1P54254 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 Gm22495-201ENSMUST00000104492 126 ntBASIC10.94□□□□□ -0.66
Atxn1P54254 Gm12009-201ENSMUST00000121361 1100 ntBASIC10.94□□□□□ -0.66
Atxn1P54254 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC10.94□□□□□ -0.66
Atxn1P54254 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.94□□□□□ -0.66
Atxn1P54254 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.94□□□□□ -0.66
Atxn1P54254 Gm26174-201ENSMUST00000158415 219 ntBASIC10.94□□□□□ -0.66
Atxn1P54254 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC10.94□□□□□ -0.66
Atxn1P54254 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Atxn1P54254 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.94□□□□□ -0.66
Atxn1P54254 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC10.94□□□□□ -0.66
Atxn1P54254 Gm18256-201ENSMUST00000209087 907 ntBASIC10.94□□□□□ -0.66
Atxn1P54254 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC10.94□□□□□ -0.66
Atxn1P54254 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Atxn1P54254 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Atxn1P54254 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Atxn1P54254 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Atxn1P54254 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Atxn1P54254 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Atxn1P54254 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms