Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf1bP25119 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf1bP25119 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf1bP25119 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf1bP25119 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf1bP25119 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.21□□□□□ -0.78
Tnfrsf1bP25119 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.78
Tnfrsf1bP25119 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Gm3828-201ENSMUST00000121817 257 ntBASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Mir1901-201ENSMUST00000122616 78 ntBASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Gm24380-201ENSMUST00000122696 324 ntBASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Gm24074-201ENSMUST00000158178 260 ntBASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Gm25072-201ENSMUST00000175233 235 ntBASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Gm43244-201ENSMUST00000196994 1285 ntBASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Gm5302-201ENSMUST00000202130 796 ntBASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 n-R5s211-201ENSMUST00000093689 119 ntBASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf1bP25119 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Gm14807-201ENSMUST00000116640 983 ntBASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Gm22379-201ENSMUST00000157480 131 ntBASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Gm16165-201ENSMUST00000160140 795 ntBASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Gm27438-201ENSMUST00000183480 110 ntBASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Gm3726-201ENSMUST00000203110 785 ntBASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms