Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Fam217a-202ENSMUST00000223834 2253 ntAPPRIS ALT2 BASIC8.9□□□□□ -0.98
Cdx1P18111 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC8.9□□□□□ -0.98
Cdx1P18111 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Cdx1P18111 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Cdx1P18111 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx1P18111 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx1P18111 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx1P18111 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx1P18111 Gm45635-201ENSMUST00000211516 2134 ntBASIC8.9□□□□□ -0.99
Cdx1P18111 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC8.9□□□□□ -0.99
Cdx1P18111 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC8.9□□□□□ -0.99
Cdx1P18111 Gm43221-201ENSMUST00000197612 2071 ntBASIC8.9□□□□□ -0.99
Cdx1P18111 Decr1-201ENSMUST00000029877 2959 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Cdx1P18111 Gpr68-202ENSMUST00000110065 2900 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Cdx1P18111 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Cdx1P18111 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Cdx1P18111 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Cdx1P18111 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Cdx1P18111 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Cdx1P18111 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC8.9□□□□□ -0.99
Cdx1P18111 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Cdx1P18111 Gm12709-201ENSMUST00000149348 1912 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Cdx1P18111 Taf8-201ENSMUST00000067103 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Cdx1P18111 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Esrp2-201ENSMUST00000115979 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Cdx1P18111 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Cdx1P18111 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC8.89□□□□□ -0.99
Cdx1P18111 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC8.89□□□□□ -0.99
Cdx1P18111 Gm13461-201ENSMUST00000120980 662 ntBASIC8.89□□□□□ -0.99
Cdx1P18111 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC8.89□□□□□ -0.99
Cdx1P18111 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC8.89□□□□□ -0.99
Cdx1P18111 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC8.89□□□□□ -0.99
Cdx1P18111 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC8.89□□□□□ -0.99
Cdx1P18111 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC8.89□□□□□ -0.99
Cdx1P18111 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC8.89□□□□□ -0.99
Cdx1P18111 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Cdx1P18111 Gm18038-201ENSMUST00000197900 485 ntBASIC8.89□□□□□ -0.99
Cdx1P18111 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC8.89□□□□□ -0.99
Cdx1P18111 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC8.89□□□□□ -0.99
Cdx1P18111 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC8.89□□□□□ -0.99
Cdx1P18111 CT009718.3-201ENSMUST00000221116 367 ntBASIC8.89□□□□□ -0.99
Cdx1P18111 Gm14267-206ENSMUST00000226870 1209 ntBASIC8.89□□□□□ -0.99
Cdx1P18111 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Cdx1P18111 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Gm9996-201ENSMUST00000070359 913 ntBASIC8.89□□□□□ -0.99
Cdx1P18111 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
Cdx1P18111 Platr9-202ENSMUST00000149572 1556 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC8.89□□□□□ -0.99
Cdx1P18111 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC8.89□□□□□ -0.99
Cdx1P18111 AC154186.1-201ENSMUST00000227711 1597 ntBASIC8.89□□□□□ -0.99
Cdx1P18111 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC8.89□□□□□ -0.99
Cdx1P18111 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Cdx1P18111 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Cdx1P18111 Erich3-203ENSMUST00000189969 3460 ntBASIC8.89□□□□□ -0.99
Cdx1P18111 Slc25a45-201ENSMUST00000025732 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC8.89□□□□□ -0.99
Cdx1P18111 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC8.89□□□□□ -0.99
Cdx1P18111 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 4933407K13Rik-203ENSMUST00000138943 4364 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Rerg-201ENSMUST00000032347 2075 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx1P18111 Gm44445-201ENSMUST00000204075 2683 ntBASIC8.88□□□□□ -0.99
Cdx1P18111 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC8.88□□□□□ -0.99
Cdx1P18111 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC8.88□□□□□ -0.99
Cdx1P18111 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 Gm40289-201ENSMUST00000201470 2268 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 Eno4-202ENSMUST00000200910 2567 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
Cdx1P18111 Eno4-201ENSMUST00000054280 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 Mrpl51-201ENSMUST00000032485 3427 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms