Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm10652-201ENSMUST00000199790 2622 ntBASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 CT009489.1-201ENSMUST00000227740 1893 ntBASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm42815-201ENSMUST00000198787 1470 ntBASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm43375-201ENSMUST00000196705 2480 ntBASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm12501-201ENSMUST00000119163 529 ntBASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm11244-201ENSMUST00000121243 237 ntBASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm17040-202ENSMUST00000170597 889 ntBASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm45574-201ENSMUST00000210921 331 ntBASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pcdh1F7BJK1 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Gm14208-201ENSMUST00000119645 678 ntBASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Gm12570-201ENSMUST00000122047 1030 ntBASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Gm6397-201ENSMUST00000161973 1069 ntBASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Gm23694-201ENSMUST00000179335 110 ntBASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Gm43916-201ENSMUST00000205062 967 ntBASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Gm44506-201ENSMUST00000206278 965 ntBASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms