Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.04■□□□□ 0.48
H2afb3S4R1G7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
H2afb3S4R1G7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
H2afb3S4R1G7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
H2afb3S4R1G7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afb3S4R1G7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afb3S4R1G7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.03■□□□□ 0.48
H2afb3S4R1G7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afb3S4R1G7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
H2afb3S4R1G7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afb3S4R1G7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb3S4R1G7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb3S4R1G7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb3S4R1G7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb3S4R1G7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.02■□□□□ 0.48
H2afb3S4R1G7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb3S4R1G7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb3S4R1G7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb3S4R1G7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb3S4R1G7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
H2afb3S4R1G7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb3S4R1G7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb3S4R1G7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb3S4R1G7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb3S4R1G7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb3S4R1G7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb3S4R1G7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.01■□□□□ 0.47
H2afb3S4R1G7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.01■□□□□ 0.47
H2afb3S4R1G7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb3S4R1G7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb3S4R1G7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb3S4R1G7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb3S4R1G7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb3S4R1G7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb3S4R1G7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb3S4R1G7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb3S4R1G7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18■□□□□ 0.47
H2afb3S4R1G7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18■□□□□ 0.47
H2afb3S4R1G7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
H2afb3S4R1G7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2afb3S4R1G7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2afb3S4R1G7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
H2afb3S4R1G7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2afb3S4R1G7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18■□□□□ 0.47
H2afb3S4R1G7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18■□□□□ 0.47
H2afb3S4R1G7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb3S4R1G7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb3S4R1G7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb3S4R1G7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.99■□□□□ 0.47
H2afb3S4R1G7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb3S4R1G7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb3S4R1G7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb3S4R1G7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
H2afb3S4R1G7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
H2afb3S4R1G7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb3S4R1G7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb3S4R1G7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb3S4R1G7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb3S4R1G7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb3S4R1G7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
H2afb3S4R1G7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb3S4R1G7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb3S4R1G7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb3S4R1G7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
H2afb3S4R1G7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb3S4R1G7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.98■□□□□ 0.47
H2afb3S4R1G7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.98■□□□□ 0.47
H2afb3S4R1G7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
H2afb3S4R1G7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb3S4R1G7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.98■□□□□ 0.47
H2afb3S4R1G7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb3S4R1G7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb3S4R1G7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb3S4R1G7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb3S4R1G7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb3S4R1G7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.97■□□□□ 0.47
H2afb3S4R1G7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb3S4R1G7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.97■□□□□ 0.47
H2afb3S4R1G7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb3S4R1G7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb3S4R1G7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.96■□□□□ 0.47
H2afb3S4R1G7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb3S4R1G7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb3S4R1G7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb3S4R1G7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
H2afb3S4R1G7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb3S4R1G7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
H2afb3S4R1G7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb3S4R1G7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb3S4R1G7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
H2afb3S4R1G7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb3S4R1G7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.96■□□□□ 0.46
H2afb3S4R1G7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb3S4R1G7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
H2afb3S4R1G7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb3S4R1G7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb3S4R1G7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb3S4R1G7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb3S4R1G7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb3S4R1G7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms