Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Gm43060-201ENSMUST00000200621 289 ntBASIC21.85■■□□□ 1.09
Nr1h3Q9Z0Y9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
Nr1h3Q9Z0Y9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nr1h3Q9Z0Y9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nr1h3Q9Z0Y9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Nr1h3Q9Z0Y9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nr1h3Q9Z0Y9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.84■■□□□ 1.09
Nr1h3Q9Z0Y9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Nr1h3Q9Z0Y9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nr1h3Q9Z0Y9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nr1h3Q9Z0Y9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nr1h3Q9Z0Y9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Nr1h3Q9Z0Y9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nr1h3Q9Z0Y9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nr1h3Q9Z0Y9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.83■■□□□ 1.09
Nr1h3Q9Z0Y9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nr1h3Q9Z0Y9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
Nr1h3Q9Z0Y9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Nr1h3Q9Z0Y9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nr1h3Q9Z0Y9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.83■■□□□ 1.08
Nr1h3Q9Z0Y9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Nr1h3Q9Z0Y9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nr1h3Q9Z0Y9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Nr1h3Q9Z0Y9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
Nr1h3Q9Z0Y9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.82■■□□□ 1.08
Nr1h3Q9Z0Y9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nr1h3Q9Z0Y9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nr1h3Q9Z0Y9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nr1h3Q9Z0Y9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nr1h3Q9Z0Y9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nr1h3Q9Z0Y9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1h3Q9Z0Y9 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.8■■□□□ 1.08
Nr1h3Q9Z0Y9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1h3Q9Z0Y9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1h3Q9Z0Y9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1h3Q9Z0Y9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1h3Q9Z0Y9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.8■■□□□ 1.08
Nr1h3Q9Z0Y9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.8■■□□□ 1.08
Nr1h3Q9Z0Y9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.8■■□□□ 1.08
Nr1h3Q9Z0Y9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1h3Q9Z0Y9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1h3Q9Z0Y9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Nr1h3Q9Z0Y9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr1h3Q9Z0Y9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.79■■□□□ 1.08
Nr1h3Q9Z0Y9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr1h3Q9Z0Y9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr1h3Q9Z0Y9 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.79■■□□□ 1.08
Nr1h3Q9Z0Y9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr1h3Q9Z0Y9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr1h3Q9Z0Y9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr1h3Q9Z0Y9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nr1h3Q9Z0Y9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nr1h3Q9Z0Y9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.78■■□□□ 1.08
Nr1h3Q9Z0Y9 Gm10493-201ENSMUST00000097270 612 ntBASIC21.78■■□□□ 1.08
Nr1h3Q9Z0Y9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nr1h3Q9Z0Y9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nr1h3Q9Z0Y9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nr1h3Q9Z0Y9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nr1h3Q9Z0Y9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Nr1h3Q9Z0Y9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nr1h3Q9Z0Y9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nr1h3Q9Z0Y9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nr1h3Q9Z0Y9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Nr1h3Q9Z0Y9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.77■■□□□ 1.08
Nr1h3Q9Z0Y9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nr1h3Q9Z0Y9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nr1h3Q9Z0Y9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nr1h3Q9Z0Y9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nr1h3Q9Z0Y9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nr1h3Q9Z0Y9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Nr1h3Q9Z0Y9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.76■■□□□ 1.07
Nr1h3Q9Z0Y9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr1h3Q9Z0Y9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr1h3Q9Z0Y9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr1h3Q9Z0Y9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr1h3Q9Z0Y9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr1h3Q9Z0Y9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nr1h3Q9Z0Y9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
Nr1h3Q9Z0Y9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nr1h3Q9Z0Y9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nr1h3Q9Z0Y9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nr1h3Q9Z0Y9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nr1h3Q9Z0Y9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nr1h3Q9Z0Y9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nr1h3Q9Z0Y9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nr1h3Q9Z0Y9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nr1h3Q9Z0Y9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nr1h3Q9Z0Y9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nr1h3Q9Z0Y9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Nr1h3Q9Z0Y9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nr1h3Q9Z0Y9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.74■■□□□ 1.07
Nr1h3Q9Z0Y9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Nr1h3Q9Z0Y9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nr1h3Q9Z0Y9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nr1h3Q9Z0Y9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.74■■□□□ 1.07
Nr1h3Q9Z0Y9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nr1h3Q9Z0Y9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nr1h3Q9Z0Y9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nr1h3Q9Z0Y9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.73■■□□□ 1.07
Nr1h3Q9Z0Y9 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms