Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ap4s1Q9WVL1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ap4s1Q9WVL1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ap4s1Q9WVL1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.25■□□□□ 0.67
Ap4s1Q9WVL1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.25■□□□□ 0.67
Ap4s1Q9WVL1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ap4s1Q9WVL1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ap4s1Q9WVL1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ap4s1Q9WVL1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ap4s1Q9WVL1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ap4s1Q9WVL1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ap4s1Q9WVL1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ap4s1Q9WVL1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Ap4s1Q9WVL1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ap4s1Q9WVL1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.24■□□□□ 0.67
Ap4s1Q9WVL1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ap4s1Q9WVL1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ap4s1Q9WVL1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ap4s1Q9WVL1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ap4s1Q9WVL1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ap4s1Q9WVL1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ap4s1Q9WVL1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ap4s1Q9WVL1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Ap4s1Q9WVL1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ap4s1Q9WVL1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ap4s1Q9WVL1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ap4s1Q9WVL1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Ap4s1Q9WVL1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ap4s1Q9WVL1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ap4s1Q9WVL1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ap4s1Q9WVL1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ap4s1Q9WVL1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ap4s1Q9WVL1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ap4s1Q9WVL1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ap4s1Q9WVL1 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.21■□□□□ 0.67
Ap4s1Q9WVL1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ap4s1Q9WVL1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ap4s1Q9WVL1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ap4s1Q9WVL1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ap4s1Q9WVL1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ap4s1Q9WVL1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ap4s1Q9WVL1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ap4s1Q9WVL1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ap4s1Q9WVL1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ap4s1Q9WVL1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ap4s1Q9WVL1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ap4s1Q9WVL1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ap4s1Q9WVL1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ap4s1Q9WVL1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.2■□□□□ 0.66
Ap4s1Q9WVL1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ap4s1Q9WVL1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ap4s1Q9WVL1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ap4s1Q9WVL1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ap4s1Q9WVL1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ap4s1Q9WVL1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.19■□□□□ 0.66
Ap4s1Q9WVL1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ap4s1Q9WVL1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.19■□□□□ 0.66
Ap4s1Q9WVL1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.19■□□□□ 0.66
Ap4s1Q9WVL1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ap4s1Q9WVL1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ap4s1Q9WVL1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ap4s1Q9WVL1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ap4s1Q9WVL1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.18■□□□□ 0.66
Ap4s1Q9WVL1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.18■□□□□ 0.66
Ap4s1Q9WVL1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ap4s1Q9WVL1 Gm11687-201ENSMUST00000118911 886 ntBASIC19.18■□□□□ 0.66
Ap4s1Q9WVL1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ap4s1Q9WVL1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ap4s1Q9WVL1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ap4s1Q9WVL1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ap4s1Q9WVL1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Ap4s1Q9WVL1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ap4s1Q9WVL1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ap4s1Q9WVL1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ap4s1Q9WVL1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.17■□□□□ 0.66
Ap4s1Q9WVL1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.17■□□□□ 0.66
Ap4s1Q9WVL1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ap4s1Q9WVL1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ap4s1Q9WVL1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ap4s1Q9WVL1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ap4s1Q9WVL1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ap4s1Q9WVL1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ap4s1Q9WVL1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
Ap4s1Q9WVL1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ap4s1Q9WVL1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Ap4s1Q9WVL1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ap4s1Q9WVL1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ap4s1Q9WVL1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ap4s1Q9WVL1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ap4s1Q9WVL1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ap4s1Q9WVL1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ap4s1Q9WVL1 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.15■□□□□ 0.66
Ap4s1Q9WVL1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ap4s1Q9WVL1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ap4s1Q9WVL1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ap4s1Q9WVL1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ap4s1Q9WVL1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ap4s1Q9WVL1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ap4s1Q9WVL1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ap4s1Q9WVL1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms