Protein–RNA interactions for Protein: Q9WV80

Snx1, Sorting nexin-1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx1Q9WV80 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snx1Q9WV80 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Snx1Q9WV80 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snx1Q9WV80 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snx1Q9WV80 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Snx1Q9WV80 Mir6538-201ENSMUST00000183713 110 ntBASIC20.74■□□□□ 0.91
Snx1Q9WV80 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
Snx1Q9WV80 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.74■□□□□ 0.91
Snx1Q9WV80 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snx1Q9WV80 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Snx1Q9WV80 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snx1Q9WV80 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snx1Q9WV80 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snx1Q9WV80 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snx1Q9WV80 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snx1Q9WV80 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Snx1Q9WV80 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.73■□□□□ 0.91
Snx1Q9WV80 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.73■□□□□ 0.91
Snx1Q9WV80 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Snx1Q9WV80 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Snx1Q9WV80 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snx1Q9WV80 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snx1Q9WV80 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snx1Q9WV80 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.72■□□□□ 0.91
Snx1Q9WV80 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.72■□□□□ 0.91
Snx1Q9WV80 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snx1Q9WV80 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Snx1Q9WV80 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snx1Q9WV80 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Snx1Q9WV80 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Snx1Q9WV80 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.72■□□□□ 0.91
Snx1Q9WV80 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snx1Q9WV80 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Snx1Q9WV80 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snx1Q9WV80 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Snx1Q9WV80 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Snx1Q9WV80 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Snx1Q9WV80 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Snx1Q9WV80 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Snx1Q9WV80 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Snx1Q9WV80 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Snx1Q9WV80 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snx1Q9WV80 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snx1Q9WV80 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snx1Q9WV80 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snx1Q9WV80 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Snx1Q9WV80 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snx1Q9WV80 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snx1Q9WV80 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snx1Q9WV80 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snx1Q9WV80 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snx1Q9WV80 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snx1Q9WV80 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snx1Q9WV80 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Snx1Q9WV80 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.68■□□□□ 0.9
Snx1Q9WV80 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snx1Q9WV80 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snx1Q9WV80 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snx1Q9WV80 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Snx1Q9WV80 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.68■□□□□ 0.9
Snx1Q9WV80 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Snx1Q9WV80 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.67■□□□□ 0.9
Snx1Q9WV80 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snx1Q9WV80 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snx1Q9WV80 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snx1Q9WV80 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Snx1Q9WV80 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snx1Q9WV80 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Snx1Q9WV80 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx1Q9WV80 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.66■□□□□ 0.9
Snx1Q9WV80 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Snx1Q9WV80 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx1Q9WV80 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Snx1Q9WV80 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx1Q9WV80 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Snx1Q9WV80 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.66■□□□□ 0.9
Snx1Q9WV80 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Snx1Q9WV80 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx1Q9WV80 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Snx1Q9WV80 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Snx1Q9WV80 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Snx1Q9WV80 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Snx1Q9WV80 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Snx1Q9WV80 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Snx1Q9WV80 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx1Q9WV80 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Snx1Q9WV80 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.64■□□□□ 0.89
Snx1Q9WV80 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snx1Q9WV80 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.64■□□□□ 0.89
Snx1Q9WV80 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snx1Q9WV80 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Snx1Q9WV80 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx1Q9WV80 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx1Q9WV80 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx1Q9WV80 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.63■□□□□ 0.89
Snx1Q9WV80 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx1Q9WV80 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Snx1Q9WV80 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx1Q9WV80 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Snx1Q9WV80 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms