Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx9Q9WUH2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.2■□□□□ 0.66
Lhx9Q9WUH2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Lhx9Q9WUH2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx9Q9WUH2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Lhx9Q9WUH2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx9Q9WUH2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Lhx9Q9WUH2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx9Q9WUH2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.2■□□□□ 0.66
Lhx9Q9WUH2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx9Q9WUH2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx9Q9WUH2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.19■□□□□ 0.66
Lhx9Q9WUH2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx9Q9WUH2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Lhx9Q9WUH2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx9Q9WUH2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx9Q9WUH2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.19■□□□□ 0.66
Lhx9Q9WUH2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.19■□□□□ 0.66
Lhx9Q9WUH2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Lhx9Q9WUH2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx9Q9WUH2 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.19■□□□□ 0.66
Lhx9Q9WUH2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx9Q9WUH2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx9Q9WUH2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx9Q9WUH2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx9Q9WUH2 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.18■□□□□ 0.66
Lhx9Q9WUH2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx9Q9WUH2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx9Q9WUH2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx9Q9WUH2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx9Q9WUH2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx9Q9WUH2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx9Q9WUH2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Lhx9Q9WUH2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx9Q9WUH2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx9Q9WUH2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx9Q9WUH2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.17■□□□□ 0.66
Lhx9Q9WUH2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx9Q9WUH2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx9Q9WUH2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx9Q9WUH2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx9Q9WUH2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx9Q9WUH2 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.17■□□□□ 0.66
Lhx9Q9WUH2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx9Q9WUH2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx9Q9WUH2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx9Q9WUH2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx9Q9WUH2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Lhx9Q9WUH2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx9Q9WUH2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
Lhx9Q9WUH2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx9Q9WUH2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.16■□□□□ 0.66
Lhx9Q9WUH2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Lhx9Q9WUH2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.16■□□□□ 0.66
Lhx9Q9WUH2 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.16■□□□□ 0.66
Lhx9Q9WUH2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.16■□□□□ 0.66
Lhx9Q9WUH2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx9Q9WUH2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
Lhx9Q9WUH2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.15■□□□□ 0.66
Lhx9Q9WUH2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx9Q9WUH2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx9Q9WUH2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Lhx9Q9WUH2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx9Q9WUH2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.15■□□□□ 0.66
Lhx9Q9WUH2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx9Q9WUH2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx9Q9WUH2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx9Q9WUH2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx9Q9WUH2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Lhx9Q9WUH2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lhx9Q9WUH2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx9Q9WUH2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Lhx9Q9WUH2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Lhx9Q9WUH2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx9Q9WUH2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.14■□□□□ 0.65
Lhx9Q9WUH2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx9Q9WUH2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx9Q9WUH2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.13■□□□□ 0.65
Lhx9Q9WUH2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx9Q9WUH2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx9Q9WUH2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx9Q9WUH2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Lhx9Q9WUH2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.13■□□□□ 0.65
Lhx9Q9WUH2 Gm8493-201ENSMUST00000196881 489 ntBASIC19.13■□□□□ 0.65
Lhx9Q9WUH2 Gm43017-201ENSMUST00000198296 752 ntBASIC19.13■□□□□ 0.65
Lhx9Q9WUH2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx9Q9WUH2 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.13■□□□□ 0.65
Lhx9Q9WUH2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Lhx9Q9WUH2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx9Q9WUH2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx9Q9WUH2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx9Q9WUH2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx9Q9WUH2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Lhx9Q9WUH2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx9Q9WUH2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx9Q9WUH2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Lhx9Q9WUH2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx9Q9WUH2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Lhx9Q9WUH2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lhx9Q9WUH2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms