Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.39■■□□□ 1.01
Rfx5Q9JL61 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rfx5Q9JL61 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.39■■□□□ 1.01
Rfx5Q9JL61 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rfx5Q9JL61 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rfx5Q9JL61 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rfx5Q9JL61 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rfx5Q9JL61 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Rfx5Q9JL61 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rfx5Q9JL61 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rfx5Q9JL61 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rfx5Q9JL61 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rfx5Q9JL61 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rfx5Q9JL61 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.38■■□□□ 1.01
Rfx5Q9JL61 Gm43137-201ENSMUST00000198052 594 ntBASIC21.38■■□□□ 1.01
Rfx5Q9JL61 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
Rfx5Q9JL61 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rfx5Q9JL61 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rfx5Q9JL61 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rfx5Q9JL61 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.38■■□□□ 1.01
Rfx5Q9JL61 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.37■■□□□ 1.01
Rfx5Q9JL61 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rfx5Q9JL61 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Rfx5Q9JL61 Mir6236-201ENSMUST00000184437 123 ntBASIC21.37■■□□□ 1.01
Rfx5Q9JL61 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.37■■□□□ 1.01
Rfx5Q9JL61 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rfx5Q9JL61 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Rfx5Q9JL61 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rfx5Q9JL61 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rfx5Q9JL61 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rfx5Q9JL61 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.37■■□□□ 1.01
Rfx5Q9JL61 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rfx5Q9JL61 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.36■■□□□ 1.01
Rfx5Q9JL61 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rfx5Q9JL61 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rfx5Q9JL61 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rfx5Q9JL61 Gm12821-201ENSMUST00000120022 600 ntBASIC21.35■■□□□ 1.01
Rfx5Q9JL61 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.35■■□□□ 1.01
Rfx5Q9JL61 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rfx5Q9JL61 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
Rfx5Q9JL61 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rfx5Q9JL61 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rfx5Q9JL61 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rfx5Q9JL61 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rfx5Q9JL61 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.34■■□□□ 1.01
Rfx5Q9JL61 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rfx5Q9JL61 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rfx5Q9JL61 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfx5Q9JL61 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfx5Q9JL61 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfx5Q9JL61 Gm45417-201ENSMUST00000209533 758 ntBASIC21.33■■□□□ 1.01
Rfx5Q9JL61 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rfx5Q9JL61 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfx5Q9JL61 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Rfx5Q9JL61 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Rfx5Q9JL61 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfx5Q9JL61 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Rfx5Q9JL61 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Rfx5Q9JL61 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rfx5Q9JL61 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Rfx5Q9JL61 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfx5Q9JL61 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfx5Q9JL61 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rfx5Q9JL61 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfx5Q9JL61 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfx5Q9JL61 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfx5Q9JL61 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfx5Q9JL61 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.32■■□□□ 1
Rfx5Q9JL61 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfx5Q9JL61 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rfx5Q9JL61 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.31■■□□□ 1
Rfx5Q9JL61 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx5Q9JL61 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx5Q9JL61 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx5Q9JL61 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx5Q9JL61 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.31■■□□□ 1
Rfx5Q9JL61 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx5Q9JL61 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx5Q9JL61 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.31■■□□□ 1
Rfx5Q9JL61 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx5Q9JL61 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx5Q9JL61 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfx5Q9JL61 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Rfx5Q9JL61 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rfx5Q9JL61 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rfx5Q9JL61 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rfx5Q9JL61 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.3■■□□□ 1
Rfx5Q9JL61 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfx5Q9JL61 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Rfx5Q9JL61 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfx5Q9JL61 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfx5Q9JL61 Gm12251-201ENSMUST00000117893 792 ntBASIC21.29■■□□□ 1
Rfx5Q9JL61 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.29■■□□□ 1
Rfx5Q9JL61 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rfx5Q9JL61 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.28■■□□□ 1
Rfx5Q9JL61 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rfx5Q9JL61 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.28■■□□□ 1
Rfx5Q9JL61 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Rfx5Q9JL61 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Rfx5Q9JL61 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms