Protein–RNA interactions for Protein: Q9D7Z6

Clca1, Calcium-activated chloride channel regulator 1, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca1Q9D7Z6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clca1Q9D7Z6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clca1Q9D7Z6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clca1Q9D7Z6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Clca1Q9D7Z6 Gm15039-201ENSMUST00000118914 875 ntBASIC20.22■□□□□ 0.83
Clca1Q9D7Z6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clca1Q9D7Z6 Gm13241-201ENSMUST00000094493 780 ntBASIC20.22■□□□□ 0.83
Clca1Q9D7Z6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.22■□□□□ 0.83
Clca1Q9D7Z6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clca1Q9D7Z6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clca1Q9D7Z6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Clca1Q9D7Z6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clca1Q9D7Z6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.21■□□□□ 0.83
Clca1Q9D7Z6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clca1Q9D7Z6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clca1Q9D7Z6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clca1Q9D7Z6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clca1Q9D7Z6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clca1Q9D7Z6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clca1Q9D7Z6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clca1Q9D7Z6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Clca1Q9D7Z6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Clca1Q9D7Z6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clca1Q9D7Z6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.2■□□□□ 0.82
Clca1Q9D7Z6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clca1Q9D7Z6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clca1Q9D7Z6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clca1Q9D7Z6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clca1Q9D7Z6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clca1Q9D7Z6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.19■□□□□ 0.82
Clca1Q9D7Z6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.19■□□□□ 0.82
Clca1Q9D7Z6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Clca1Q9D7Z6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.19■□□□□ 0.82
Clca1Q9D7Z6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clca1Q9D7Z6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clca1Q9D7Z6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clca1Q9D7Z6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clca1Q9D7Z6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clca1Q9D7Z6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clca1Q9D7Z6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.18■□□□□ 0.82
Clca1Q9D7Z6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clca1Q9D7Z6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clca1Q9D7Z6 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.18■□□□□ 0.82
Clca1Q9D7Z6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Clca1Q9D7Z6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Clca1Q9D7Z6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Clca1Q9D7Z6 Gm12922-201ENSMUST00000120626 809 ntBASIC20.18■□□□□ 0.82
Clca1Q9D7Z6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
Clca1Q9D7Z6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Clca1Q9D7Z6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clca1Q9D7Z6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clca1Q9D7Z6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Clca1Q9D7Z6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clca1Q9D7Z6 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.17■□□□□ 0.82
Clca1Q9D7Z6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Clca1Q9D7Z6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clca1Q9D7Z6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Clca1Q9D7Z6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Clca1Q9D7Z6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clca1Q9D7Z6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clca1Q9D7Z6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clca1Q9D7Z6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clca1Q9D7Z6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Clca1Q9D7Z6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clca1Q9D7Z6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Clca1Q9D7Z6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Clca1Q9D7Z6 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.17■□□□□ 0.82
Clca1Q9D7Z6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Clca1Q9D7Z6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clca1Q9D7Z6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Clca1Q9D7Z6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clca1Q9D7Z6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clca1Q9D7Z6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.16■□□□□ 0.82
Clca1Q9D7Z6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clca1Q9D7Z6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clca1Q9D7Z6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Clca1Q9D7Z6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clca1Q9D7Z6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.16■□□□□ 0.82
Clca1Q9D7Z6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clca1Q9D7Z6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clca1Q9D7Z6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clca1Q9D7Z6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.15■□□□□ 0.82
Clca1Q9D7Z6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clca1Q9D7Z6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clca1Q9D7Z6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Clca1Q9D7Z6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Clca1Q9D7Z6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Clca1Q9D7Z6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clca1Q9D7Z6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.14■□□□□ 0.81
Clca1Q9D7Z6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.14■□□□□ 0.81
Clca1Q9D7Z6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clca1Q9D7Z6 Gm21956-201ENSMUST00000179946 522 ntBASIC20.14■□□□□ 0.81
Clca1Q9D7Z6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clca1Q9D7Z6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clca1Q9D7Z6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clca1Q9D7Z6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clca1Q9D7Z6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.14■□□□□ 0.81
Clca1Q9D7Z6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clca1Q9D7Z6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Clca1Q9D7Z6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms