Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShpkQ9D5J6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ShpkQ9D5J6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.8■□□□□ 0.28
ShpkQ9D5J6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ShpkQ9D5J6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShpkQ9D5J6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShpkQ9D5J6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ShpkQ9D5J6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ShpkQ9D5J6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShpkQ9D5J6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
ShpkQ9D5J6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ShpkQ9D5J6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShpkQ9D5J6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShpkQ9D5J6 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.79■□□□□ 0.28
ShpkQ9D5J6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShpkQ9D5J6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShpkQ9D5J6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShpkQ9D5J6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShpkQ9D5J6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ShpkQ9D5J6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShpkQ9D5J6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShpkQ9D5J6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ShpkQ9D5J6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ShpkQ9D5J6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ShpkQ9D5J6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ShpkQ9D5J6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ShpkQ9D5J6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.78■□□□□ 0.28
ShpkQ9D5J6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ShpkQ9D5J6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ShpkQ9D5J6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ShpkQ9D5J6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ShpkQ9D5J6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.77■□□□□ 0.28
ShpkQ9D5J6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
ShpkQ9D5J6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ShpkQ9D5J6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ShpkQ9D5J6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ShpkQ9D5J6 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.77■□□□□ 0.28
ShpkQ9D5J6 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.77■□□□□ 0.28
ShpkQ9D5J6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ShpkQ9D5J6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ShpkQ9D5J6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ShpkQ9D5J6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ShpkQ9D5J6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShpkQ9D5J6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ShpkQ9D5J6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ShpkQ9D5J6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShpkQ9D5J6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.76■□□□□ 0.27
ShpkQ9D5J6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShpkQ9D5J6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
ShpkQ9D5J6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShpkQ9D5J6 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.76■□□□□ 0.27
ShpkQ9D5J6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.76■□□□□ 0.27
ShpkQ9D5J6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ShpkQ9D5J6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShpkQ9D5J6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShpkQ9D5J6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShpkQ9D5J6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShpkQ9D5J6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Gm44428-201ENSMUST00000204474 874 ntBASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShpkQ9D5J6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShpkQ9D5J6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
ShpkQ9D5J6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShpkQ9D5J6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShpkQ9D5J6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShpkQ9D5J6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShpkQ9D5J6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ShpkQ9D5J6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.74■□□□□ 0.27
ShpkQ9D5J6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShpkQ9D5J6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShpkQ9D5J6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ShpkQ9D5J6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ShpkQ9D5J6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.73■□□□□ 0.27
ShpkQ9D5J6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.73■□□□□ 0.27
ShpkQ9D5J6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.73■□□□□ 0.27
ShpkQ9D5J6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ShpkQ9D5J6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ShpkQ9D5J6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ShpkQ9D5J6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
ShpkQ9D5J6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms